Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03901 ATGACGGATGTGATACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAGACGAACAGCACCATTGTTCAGATCAACAAGATCTTCAAGGACGGGATTGGTCTCGGTGGCATCTTCCACAGCGCCGTTCAGGTTTATGGTGAAGATGAATGGTCATTTGGATTCTGTGAGCAAGGTACTGGAGTTTTTAGTTGCCCTTCTGGAAAAAATCCAATGTACACATACCGAGAATTTATTGTTCTAGGGAAAACAAGTTGTTCCATTTTCAAGGTAAATCAAATATTGAGAGAACTCAGTAGAGAGTGGCCTGGGTGTTCGTACGATCTATTGGCCAAAAACTGCAACCACTTCTGCGATGAATTCTGTGAGAGGCTTGGTGTTCCAAAACTTCCAGGTTGGGTTAATAGGTTTGCGAATGCTGGTGACACTGCTATGGAAGTGGCTGGAAATACAGCAATACGTTTGAGGCAAGCCAAGACAGAGGTTGTATCGGCAAGCAAAGTAGCATTACGGTTCCTTGTAGGTCTTACCAATAATGTCAGAAATGGTGCTCCACCAGAGTCCCCTAATTCAAACAGAGGAGGAGCATCAGCATCACCTAGATTTCAAGCTTCTTGGTTGAAAAATATGATTACCACTGGTGCAAAACCATCTACTAGTTCAGAAGCTGAGAATGAGAACGGGGTTGAGCCTCGACGACCACCGACGCATGAAGATGACAAGGCACTGCTACGGAGTTCATCATCTTCACATGATTCTTGA 765 0.4431 MTDVILHIYDVTNSGSEKTNSTIVQINKIFKDGIGLGGIFHSAVQVYGEDEWSFGFCEQGTGVFSCPSGKNPMYTYREFIVLGKTSCSIFKVNQILRELSREWPGCSYDLLAKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTAIRLRQAKTEVVSASKVALRFLVGLTNNVRNGAPPESPNSNRGGASASPRFQASWLKNMITTGAKPSTSSEAENENGVEPRRPPTHEDDKALLRSSSSSHDS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03901 254 Pfam PPPDE putative peptidase domain 3 147 IPR008580 GO:0008233
Aip05g03901 254 PANTHER PPPDE PUTATIVE THIOL PEPTIDASE FAMILY PROTEIN-RELATED 1 228 - -
Aip05g03901 254 MobiDBLite consensus disorder prediction 227 254 - -
Aip05g03901 254 Gene3D PPPDE domains 1 169 IPR042266 -
Aip05g03901 254 PANTHER DESUMOYLATING ISOPEPTIDASE 1 228 IPR008580 GO:0008233
Aip05g03901 254 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Aip05g03901 254 MobiDBLite consensus disorder prediction 180 254 - -
Aip05g03901 254 SMART DUF862_2a 2 157 IPR008580 GO:0008233
Aip05g03901 254 MobiDBLite consensus disorder prediction 182 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03901 Aip-Chr5 147205514 147208217 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03901 - - gmx:100786944 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03901 05 147205514 147208217 Aip05g03901 05 147205514 147208217 ECH