LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip05g03889	ATGGAGGCACCATTACTCATGAGAGAGTCAAGTCCTCCAACAGAATCTGATGATTACTTGGAAGTGAAGAACTTGAAGGATGCAAAATTTGTGTTGTGCAGTGAGACAGTGAAGTTATGGAAGATTGCAGGGCCAGTGGCACTCTCATCACTCTTTCAGTACCTCACAGTTTCTTCACTCAACATCTATGCTGGTCACCTTGGAGACATTGTTCTATCTTCCATCTCTCTTTACCTTGGTGTCATATCCTGCTTTTATTATAATTTCCTGTTTGGCATGTCATCAGCACTGCTAACACTATGTGGACAAGCTTATGGAGCAGGACAAGTTAAATCCACTGGAATCTATCTCCAAAGATCATGGATTGTGCTAACTATGAGCTGCATAATCCTCTTACCAACCCACATTTATGCAACTCCAATCTTAGAGTTCCTTGGCCAAGACAAAGAAATATCAGAGCTTGCTGGAAACTATGCATTAAAAGCAATTCCATCCATGTTCTCCTTTGCTTTCATACTCCCCACACAAAGATTCCTTCAAGCTCAAAGCAAGGTTATGGTGATAACATGCATAACATTTGTGGCCCTACTTGTACAAAATTTGCTTCTTTATGTCTTCATCTATGGATTTAATTGGGGATCAACAGGGTTGGCTATGGCTCATAATGTCTCACATTGGGTTCTTGCTTTGGCTCTTGTTGTGTATGCTTCTTGTTGGTGTAAGGAAGGTTGGAGTGGTTATTCTTTCTTGGCTTTCAAAGATTTGTTGCCATTTACTTGGCTAAGTCTTTCTTTATCTGTTATGACATGCTTGGAGCAATGGTATTCTACTTTCATTGTCCTTCTTGCTGGTCACTTAGACAACCCTGTTATTGCTCTTGCTTCCTATTCTATTTGCATCAATATTCAGGGTTGGTACTTGATGCTGCTACTTGGAATAAGCACTGCCATAAGTGTTCGAGTGTCCAATACGCTTGGCATGTCACATCCAAGAGCAGCAAGATACTCATTCATTGTGACAATGTGTGAATCTCTCTTCATTGGAATTTCATTCATGAGTGTTGTTTTGTTGTGTAAACAAAACCTTGCCATGATCTTCACCAACAGTGAGGATTTGATCAGAGCAGTGGCTGATTTAGCTTACCTTCTTGCTCTATCCATGCTTCTTAGTAGTGTTTCACAAGTCATATCAGGTGTTGCAATTGGAAGTGGATGGCAAGTGATGATTGGATACATAAACTTGGCATTGAAGAGCTTCAAGGATGCCAAGTTTGTGTTGTGCATAGAAACAGTGAAGTTATGGAAGATTGCAGCACCAATGGCACTCTCATCACTCTTTGATTTTCTCACAATTTCTTCACTCAACATATATGCTGGCCATCTTGGAGACATTGTTCTTTCTTCAATATCTCTTTACTTTGGTGTAATCAGTGCCATCTATTTTACTTTGCTGGTTGGTATGTCATCTGCATTAGCAACACTATGTGGACAAGCTTATGGAGCAGGGCAAATTCAATTCACTGGAATTTATGTCCAAAGATCATGGATTGTGTTAGTTATGACCTGCATAATCCTCTTACCAACTCACATATATGCAACACAAATCTTAAAGTTTCTTGGCCAAGACAAAGAAATAGCAAATCTTGCAGGCAAGTATGCAATGCAAGTAATTCCCACCATGTTCTCCTATGCTATTAGTTTTCCAATTCAAAGATTTCTTCAAGCACAGAGCAAGGTCAATGTGATCATGTTCACATCACTTGTGTCACTAATGCTACAAAATCTGTTGCTTTATATATTCATCTATGCAATGGAATTGGGTACAACAGGGTTAGCTATGGCCAATAACATCACATGTTGGTTCATGGCTTTGTCTCTTGTTGTGTATGTTGCTGGTTGGTGCAATGAAGGTTGGAGTGGTTTTTCTTGGTTGGCTTTCAAAGATTTGTGGCCATTTACTTGGCTAAGCCTTTCTTTATCTCTTATGAATTGCTTGGAGCAATGGAATGGTACTTTCATTGTGTTGCTTGCTGGTCAACTAGACAACCCTACTCTTTCTCTTGCTTCTTATAATATTTGCTTCAATATTCTTGGTTGGTACACCATGCTGATGGTTGGAGTCAATACTGCTATAAGTGTTCGAATCTCTAATACACTTGGGATGTGTCATCCAAGAGCAGCCAAATACTCATTCTATGTGACACTGTCTCAGTCTCTCTTCATTGGAATTTTATTCTTGATTCTTGTTTTGCTGAGCAAAGAGCATCTAGCTCTCATCTTTACCAACAGCGAGGATCTGATTAGAGCTGTGTGCGATTTAGCTTACCTGCTTGGTGTAGCCATTGTTCTTAGTAGTCTCTCACAAGTTATATCAGGTGTGGCAATTGGGAGTGGATGGCAAGTTATGGTTGGATACATAAACTTGGCATGTCATTACATTGTTGGACTCTGTCTTGGCTATTTTCTTGGTTTCAATAAACATTTGGGGGTTAAGGTAATAATTAAGGATCTTCTAATAGCACATGCATATAAAATGTGTCTTCCTTTATTAAGAAATTTCTCATAG	2565	0.3938	MEAPLLMRESSPPTESDDYLEVKNLKDAKFVLCSETVKLWKIAGPVALSSLFQYLTVSSLNIYAGHLGDIVLSSISLYLGVISCFYYNFLFGMSSALLTLCGQAYGAGQVKSTGIYLQRSWIVLTMSCIILLPTHIYATPILEFLGQDKEISELAGNYALKAIPSMFSFAFILPTQRFLQAQSKVMVITCITFVALLVQNLLLYVFIYGFNWGSTGLAMAHNVSHWVLALALVVYASCWCKEGWSGYSFLAFKDLLPFTWLSLSLSVMTCLEQWYSTFIVLLAGHLDNPVIALASYSICINIQGWYLMLLLGISTAISVRVSNTLGMSHPRAARYSFIVTMCESLFIGISFMSVVLLCKQNLAMIFTNSEDLIRAVADLAYLLALSMLLSSVSQVISGVAIGSGWQVMIGYINLALKSFKDAKFVLCIETVKLWKIAAPMALSSLFDFLTISSLNIYAGHLGDIVLSSISLYFGVISAIYFTLLVGMSSALATLCGQAYGAGQIQFTGIYVQRSWIVLVMTCIILLPTHIYATQILKFLGQDKEIANLAGKYAMQVIPTMFSYAISFPIQRFLQAQSKVNVIMFTSLVSLMLQNLLLYIFIYAMELGTTGLAMANNITCWFMALSLVVYVAGWCNEGWSGFSWLAFKDLWPFTWLSLSLSLMNCLEQWNGTFIVLLAGQLDNPTLSLASYNICFNILGWYTMLMVGVNTAISVRISNTLGMCHPRAAKYSFYVTLSQSLFIGILFLILVLLSKEHLALIFTNSEDLIRAVCDLAYLLGVAIVLSSLSQVISGVAIGSGWQVMVGYINLACHYIVGLCLGYFLGFNKHLGVKVIIKDLLIAHAYKMCLPLLRNFS	854

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip05g03889	854	PANTHER	PROTEIN DETOXIFICATION	418	838	-	-
	Aip05g03889	854	CDD	MATE_eukaryotic	35	415	IPR045069	GO:0042910\|GO:1990961
	Aip05g03889	854	PANTHER	MULTIDRUG RESISTANCE PROTEIN	418	838	-	-
	Aip05g03889	854	Pfam	MatE	266	415	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Aip05g03889	854	Pfam	MatE	439	597	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Aip05g03889	854	Pfam	MatE	660	820	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Aip05g03889	854	Pfam	MatE	45	203	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Aip05g03889	854	PANTHER	MULTIDRUG RESISTANCE PROTEIN	1	415	-	-
	Aip05g03889	854	TIGRFAM	matE: MATE efflux family protein	45	414	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Aip05g03889	854	TIGRFAM	matE: MATE efflux family protein	439	831	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Aip05g03889	854	PANTHER	PROTEIN DETOXIFICATION	1	415	-	-
	Aip05g03889	854	CDD	MATE_eukaryotic	429	831	IPR045069	GO:0042910\|GO:1990961

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip05g03889	Aip-Chr5	147047920	147056687	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip05g03889	K03327		-	qsu:111985010	603.208

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip05g03889	05	147047920	147056687	Aip05g03889	05	147047920	147056687	ECH