Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03878 ATGGCACTAGCTTCTATTCCAAAAGTTGTGTTAGGCTCACTAGCCTTTGCAATTTTCTGGGTATTAGCAGTGTTCCCAGCTGTTCCTTTTCTACCAATTGGAAGAACAGCAGGATCATTGCTTGGTGCAATGCTTATGGTCATATTTCGAGTTCTTTCGCCGGATCAAGCCTACGCCGCAATTGATCTTCCAATTCTTGGCCTTCTTTTTGGAACAATGGTTGTGAGTGTGTATCTTGAAAGAGCAGACATGTTCAAGTACTTGGGAAAATTGCTATCTTGGAAGAGTAAAGGCCCAAAAGATTTGCTTTGTAGAATCTGTTTGATTTCTGCAATTTCAAGTGCTCTTTTCACCAATGACACTTCTTGTGTTGTTTTGACTGAATTCATATTGAAAATTGCAAGGCAGCATAATTTGCCACCACACCCTTTTCTTCTTGCACTTGCTTCAAGTGCTAACATTGGTTCCTCAGCAACTCCAATTGGGAATCCTCAGAATCTTGTTATTGCTGTTCAGAGTAAGATTCCATTTGGAGAGTTTCTAGTTGGTGTTCTTCCAGCTATGCTTCTTGGGGTTGTGGTGAATGCTTCAATTCTTATATTGATGTATTGGAAGTTGTTGTCTGTTCACAAAGATGAGGAGGATCCAAAAGCAGAGGTTGTAGCAGAGGAGGAGGTTAATTCTCATCAGTTTTCGCCGGCTACAATGTCTCATTTTACTTCCATGAATTCACAAGAGTGGAATATGTGTCTGGACAATGTTAGCATTCAAAACTCTCCTCAAGTTCAGACCTTGAGAAACCGGGCATCTCCGAATGAAGGCGAAATTTACAGGGTTCCTAGTAGCATTGTGGATTCCTCGAGGAACTCGAATGCGTCGAAGGAGGCAGCGAATGAAGTGGCTGAGAAGACAAGGGAGGATCATAATCATGTCAAGGTTGTTGCAGCAGAATCAAATAGTTTTGTTATGCACTTTGCAGAAGGAAGAATGGACTTTTTGGATGAGAAGTGGAAAAGGGTTTTGTGGAAATGTTGTGTTTATATGATCACTTTAGGGATGTTGATTGCAATGCTTTTAGGTTTGAATATGTCTTGGACTGCAATCACAGCTGCACTAGCCCTGGTTGTTCTTGATTTCAAAGATGCTAGGCCATGCTTAGAGAAGGTTTCCTATTCACTTTTGATATTCTTTTGTGGAATGTTTATCACAGTAGATGGGTTCAACAAAACTGGAATTCCAAGTGCTATGTGGGAATTGATGGAGCCATATTCCCATGTAGATCATGCCACTGGCATAGTAGTACTTGCACTTGTTATACTAGTCCTTTCAAATTTGGCTTCAAATGTTCCAACAGTTCTGTTGCTTGGAGGGAGAGTAGCAGCATCAGCAGCAGCAATATCAGCAAAAGATGAGAAGAAAGCATGGCTGATATTGGCATGGGTAAGCACCATTGCAGGGAACCTCTCACTGTTGGGATCAGCTGCAAACTTGATAGTGTGTGAACAAGCTCGTAGAGCACCAAATCTTGCTTACACCTTAACCTTCTGGAACCATCTCAAGTTTGGTCTTCCTTCCACTCTCATTGTCACTGCTATTGGTTTGACTCTCATAAGATAG 1617 0.4156 MALASIPKVVLGSLAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFRVLSPDQAYAAIDLPILGLLFGTMVVSVYLERADMFKYLGKLLSWKSKGPKDLLCRICLISAISSALFTNDTSCVVLTEFILKIARQHNLPPHPFLLALASSANIGSSATPIGNPQNLVIAVQSKIPFGEFLVGVLPAMLLGVVVNASILILMYWKLLSVHKDEEDPKAEVVAEEEVNSHQFSPATMSHFTSMNSQEWNMCLDNVSIQNSPQVQTLRNRASPNEGEIYRVPSSIVDSSRNSNASKEAANEVAEKTREDHNHVKVVAAESNSFVMHFAEGRMDFLDEKWKRVLWKCCVYMITLGMLIAMLLGLNMSWTAITAALALVVLDFKDARPCLEKVSYSLLIFFCGMFITVDGFNKTGIPSAMWELMEPYSHVDHATGIVVLALVILVLSNLASNVPTVLLLGGRVAASAAAISAKDEKKAWLILAWVSTIAGNLSLLGSAANLIVCEQARRAPNLAYTLTFWNHLKFGLPSTLIVTAIGLTLIR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03878 538 Pfam Citrate transporter 27 485 IPR004680 GO:0016021|GO:0055085
Aip05g03878 538 Coils Coil 536 538 - -
Aip05g03878 538 PANTHER TRANSPORTER ARSB-RELATED 1 538 - -
Aip05g03878 538 CDD YbiR_permease 28 537 - -
Aip05g03878 538 PANTHER TRANSPORTER ARSB-RELATED 1 538 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03878 - - cit:102622728 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03878 05 146962078 146964112 Aip05g03878 05 146962078 146964112 ECH