Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03876 ATGAAGAAAACTGTACATGAAAGTAAGAAAGAAGGAAGAATTATTAATGTCTCCTCGACTGGTCACCAATACTTTAGATATAGCGAAGGAATACGTTTTGATAAAATTAATGATCAATCAAGTTACAAGAGTTGGATTGCATATGGACAATCAAAACTAGCTAACATTTTACACGCAAACGAACTTGCACGGCGTCTCAAGGAAGATGGGGTGAATATCACTGCAAATTCCGTTCATCCAGGAATAGTTGTCACCAATATTTTCCGTCATAACAACATAGTGAATGGTGTGATGAACATGCTCGCGAGATGCGGGCTTAAAAATGTTAAGCAGGGAGCAGCAACAATATGTTATTTGGCATTGCATCCACAAGTGAGTGGAATAAGTGGAGAGTTTTTTATGGATGGTTATGTGGCCAAAGCAAGCTCACAGGGAAGGGATATTGATTTGGCCAAGAAACTCTGGGATTATAGCATGAATTTGACCGAGCAGAATACATAG 501 0.3892 MKKTVHESKKEGRIINVSSTGHQYFRYSEGIRFDKINDQSSYKSWIAYGQSKLANILHANELARRLKEDGVNITANSVHPGIVVTNIFRHNNIVNGVMNMLARCGLKNVKQGAATICYLALHPQVSGISGEFFMDGYVAKASSQGRDIDLAKKLWDYSMNLTEQNT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03876 166 PANTHER RETINOL DEHYDROGENASE 1 163 - -
Aip05g03876 166 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 139 IPR036291 -
Aip05g03876 166 Gene3D - 1 166 - -
Aip05g03876 166 PRINTS Glucose/ribitol dehydrogenase family signature 6 22 IPR002347 -
Aip05g03876 166 PRINTS Glucose/ribitol dehydrogenase family signature 48 67 IPR002347 -
Aip05g03876 166 PRINTS Glucose/ribitol dehydrogenase family signature 71 88 IPR002347 -
Aip05g03876 166 PANTHER SHORT-CHAIN DEHYDROGENASE TIC 32 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03876 Aip-Chr5 146948773 146950050 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03876 - K19329 aip:107641531 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03876 05 146948773 146950050 Aip09g04032 09 146640594 146644156 ECH
Aip05g03876 05 146948773 146950050 Aip05g03876 05 146948773 146950050 ECH