Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03873 ATGTCTGAAGCTGCTATGGCAGTCATGAAACCTGAGATGAAATCTTATATATGGCTTAAAACTGTGGATGGTTCTATTCAACAAGTAGAGCAAGATGTAGCCATGTTTTGCCCCATGATTTTCCAGGAAATACTTAAGACAGGCATGGGATCTTCCAAAACTTATGCCATATCTCTTCCACAACGTGTCAATCCTTCAATCTTGGGTTTAATACTTGACTACTGTCGTTTCCACCAAGTGCCAGGCCACTCTAATAAGGAGCGGAAAACCTTTGATGAAAAGTTTATTAGGATGGACACAAAGAAGTTATGTGAATTGACATCTGCTGCTGATAGCCTCCAATTGAAGCCTTTGGTTGACCTGACCAGCCGAGCACTTGCTCGGATTATAGAAGGAAAAACACCAGAGGAGATTCGTGAAACATTTCATTTGCCTGATGACCTCACTGAGGAGGAGAAACTCGAGCCTCTTAGAAATGTAACTGATGATCCACGTATTCGACTTCTAAACAGATTATATGCTAGAAAAAGGAAAGAGTTGAAAGAAAAGAAGAAACTAAAGAATGTTGACATTGAAGAGGAGCCTAAAGATGAGCGCTCAGTTGATGACCTTCTTTCATTTATTAATGGTGCAGATGGGGATATAAAGGAAATGAGTGCAAATAAGAATAAAAAGAAGAATAGGAGAAGGAAAGGCCATGCAAAAGATCTTTCTTTGGAAAATGTCAATGAAAACAAAAGGGAGTTGGATTCTGTTCCCTTTGCATGTCACAATCGCAATGTTGACAATGCCTTAAAGGCCTCTCCAAGCAAACACTCACAGACGCAAGATTTACCTCCCATGAGTTTTTCTCCAAAGCTCGAGTTTATTAATGGTGATCTTGATGATGAATTAGATCCTGCAATGAAGGAGGAACTTGACAGGGAAGTGGAAGATTTTGCTCGAAGATTAAATTCAGATTGGCCCGAAAGGATGCAAATTTTATCTTTGGGCCAAGACAGAAGACTAGTTCCAATTTCTATGAATAGCAATGTTTCCACACGCATCTTCACAGGTATGGGTTAA 1065 0.3981 MSEAAMAVMKPEMKSYIWLKTVDGSIQQVEQDVAMFCPMIFQEILKTGMGSSKTYAISLPQRVNPSILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNVTDDPRIRLLNRLYARKRKELKEKKKLKNVDIEEEPKDERSVDDLLSFINGADGDIKEMSANKNKKKNRRRKGHAKDLSLENVNENKRELDSVPFACHNRNVDNALKASPSKHSQTQDLPPMSFSPKLEFINGDLDDELDPAMKEELDREVEDFARRLNSDWPERMQILSLGQDRRLVPISMNSNVSTRIFTGMG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03873 354 PANTHER OS03G0107000 PROTEIN 1 270 - -
Aip05g03873 354 SUPERFAMILY POZ domain 15 79 IPR011333 -
Aip05g03873 354 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Aip05g03873 354 SUPERFAMILY Skp1 dimerisation domain-like 90 157 IPR036296 GO:0006511
Aip05g03873 354 SMART skp1_3 14 115 IPR001232 GO:0006511
Aip05g03873 354 Coils Coil 166 189 - -
Aip05g03873 354 PANTHER SKP1 1 270 IPR016897 GO:0006511
Aip05g03873 354 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03873 Aip-Chr5 146932451 146935924 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03873 - - gmx:100775387 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03873 05 146932451 146935924 Aip05g03873 05 146932451 146935924 ECH