Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03834 ATGAGAGATACCAACATCCTTGTGGTTGGTCAAGACGGGATTTTGCGGCCGTTGATGAAGACCGCGACGAGATCCACGACGGTTCTAGTGTTCTCTATGCTCTTCATATTCGGCGCGTTGGTATACACGCTCCTTCTCCCCTCGCATTTAATTATTTTTGGAGGCACACCTTCCAAACCACCAATACTAGCCACAACAGAAAACAACAATGTGCCTAAAATGACCAAAATGCCCCCAAAGCAAATAGAGATTCCACTAAACTGCACTGCATACAATCTAAACAAAACATGCCCCAACCATGAAGAAATCCCAGCCGACAATCAAGACCGTTTACCAAGCTCCACGTGTCCAGATTACTTCCGTTGGATCCACGAGGATCTAAGACCATGGGCCCACACAGGCATAACAAAGGAGATGGTAGACAAGGCTAGAAAAACAGCAAATTTCAAATTGGTGATTCTTAAAGGGAAGGCTTATTTGGAGACTTATGGCAAAGCGTTTCAGACAAGAGATGTTTTTACAAAGTGGGGGATATTGCAATTGTTAAGGAGGTATCCTGGGATGTTGCCAGATATGGAGTTCATGTTTGATTGTGTTGATTGGCCTGTCATTTTGGCTGAACGTTATGGTGGTTCTAATTCTAATAATGCTAGCAATGTTCCTCCACCACTCTTTAGATATTGTGCTAATGATGCTACATTGGACATTGTCTTCCCTGATTGGTCCTTTTGGGGTTGGGCTGAGATTAACATAAAGCCATGGGAGATTTTGTCTGGAGAGATGAAAGAAGGGAACAAGAGAACAACATGGCTTAAAAGAGAGCCATATGCTTACTGGAAAGGTAATCCTGATGTTGCTGACACAAGAAAAGACCTCATGAAATGCAATGTTACAGATCAACAAGATTGGAATGCTCGTATTTATAAACAGGATTGGATAAAGGAATCAAAAGAAGGGTACAAGCAATCAGATTTGGCAAGCCAATGCATTCATAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCTGTTAGCCAAAAATACATTCTAGCATGTGATTCTGTCACACTGCTTGTAAATCCACACTACTATGATTTTTTCACAAGAGGGTTGGTTCCAATGCAACATTATTGGCCAATTAAGGAAGATGACAAATGCAGATCCATTAAATTTGCTGTGGAATGGGGCAATACTCATCAGAATGAGGCTAATAGTATTGGAAAGGCAGCAAGTGATTTCATCTATGATGAATTGAAGATGGATTATGTGTATGACTACATGTTTCATCTCTTAAATAGTTATGGTAAACTATTTAGATATACACCCACTTTAAGTTCTGAAGCAGTTGAGCTATGTGTGGAGTCAATGGTTTGCAATGCTAAAGGAAGAGAAAGACAATTCATGATGGAATCAATGGTGAAGGGTCCTGCAATCACCAAACCTTGCACCATGCCTCCACCTTTTGACCCTCCATCTTTGCATGAAAACTTGAGGAGAAAAGAAAGTTTAATTCAACAAGTGGATTCATGGGAAAAGAGTTATTGGGGGAAACCAAAATAA 1560 0.4064 MRDTNILVVGQDGILRPLMKTATRSTTVLVFSMLFIFGALVYTLLLPSHLIIFGGTPSKPPILATTENNNVPKMTKMPPKQIEIPLNCTAYNLNKTCPNHEEIPADNQDRLPSSTCPDYFRWIHEDLRPWAHTGITKEMVDKARKTANFKLVILKGKAYLETYGKAFQTRDVFTKWGILQLLRRYPGMLPDMEFMFDCVDWPVILAERYGGSNSNNASNVPPPLFRYCANDATLDIVFPDWSFWGWAEINIKPWEILSGEMKEGNKRTTWLKREPYAYWKGNPDVADTRKDLMKCNVTDQQDWNARIYKQDWIKESKEGYKQSDLASQCIHRYKVYIEGSAWSVSQKYILACDSVTLLVNPHYYDFFTRGLVPMQHYWPIKEDDKCRSIKFAVEWGNTHQNEANSIGKAASDFIYDELKMDYVYDYMFHLLNSYGKLFRYTPTLSSEAVELCVESMVCNAKGRERQFMMESMVKGPAITKPCTMPPPFDPPSLHENLRRKESLIQQVDSWEKSYWGKPK 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03834 519 Pfam Glycosyl transferase family 90 113 511 IPR006598 -
Aip05g03834 519 SMART cap10 188 441 IPR006598 -
Aip05g03834 519 PANTHER MOTIF-CONTAINING PROTEIN 1, PUTATIVE-RELATED 73 516 - -
Aip05g03834 519 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 73 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03834 Aip-Chr5 146510550 146516663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03834 - - gmx:100800365 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03834 05 146510550 146516663 Aip05g03834 05 146510550 146516663 ECH