Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03823 ATGCATCATAAGGTTAATTTGGAGAGACCAATGGGATTGGAGGAAGATCCTCATGCGCCACGTAGTAGTCCTCTATCACATGCTCATGCCAATTACCAAACCAAAGTCACTGATCCTACTGGAGCAGGTGGTGGAGAAATTGATATCACCCCAGTTGAGAGATCATTGGAAAGAATGAATATCCAAAATGAGCCAAGAGCTGACCAAGAATCCAAGGTTCTTCCAACTATTTCAGAGACTCAATATCCTTCTCATCTTGGTGGGCTTGGCCACTACAACCACCGATTTTCACCTGAGCTTTCAACAGCAACCAAAACTCCATTCCCAACAGCTGATAAAAGCCATTATCAGCACTTGCCACACTTGTCAGGCGAAATCAAAACTCAATACCCGTCTGCTGGAAGCCATGATCAATTCGTGCCGGAATTTTCTCACACACACTGCCCTCCAATTAAAAGCCATGACCAAAACTTGACACAAGAGTCAACAGTTCAGTATCCTTCTACTGAAAGCCATAATCAGTTTTCAGCAGAAACAATTCCTAGAAGTTCTAATATATATGAACAAAATCCTCTGCAAGAACCAGCTTCCGACACCACCAAGGCAAGATTTGAAGAACAAACGCAACCACCTTATAAAGCAATGGAGAAACCATCAAGTCAAAGCAGTTACACTGACAAAATCTCTTCAGCTACTTCAGCTATAGCTGATAAAGCCATCACTGCTAAAAATGCTGTGGCCTCCAAGCTTGGATATGGTGAAAAAGATGATAAAACAAAGTGCCATGAAGAAAACATAAGCAGTGATAAACCATCGAACCAGAGCAGTTACACTGAGAAAATATCGTCCGCAACTTCAGCAATAGCCGATAAAGCTGTGTCAGCTAAGAACACAGTAGCTTCGAAACTAGGTTATGGCGACAAAGGTGACAGCCACGAAGAGACACAAGGAGAGAATGCTGCTGCTACTTCCACAACAGAATATGGGAAGAGAATAGCACAGTCCTTGACAGATAAACTTGCACCGGTTTATGGAAAGGTTGCTGGTGTAGGAAGTGCAGTGAAATCAAAGGTTCCTGGAACCTCAACTGGCAGTGAAAACGATAGAGGAGTGTCAGTGAAGGACTATTTTGCAGAGAAGTTGAGGCCTGGGGATGAAGACAGAGCTCTATCTGAGGTTATATCAGAGACTCTGCATCATAAGAGGAACAAAGAAGAGGAAAATGTAGTTCACAAGAGAGGAGAAGAGGAGGAGGAGGAGCATGAGAGAAGGAAGAAGATACCAATGGGGAAGGTGACAGAGTCTGAAGAAGTGAAGAGAAGGTTGGGGGTTGGAAATGAAGAGACAGAGAGGTATGAAGAGAGCTATGTAAATAGTCCTGGGAAGAGTGTGGTTGATAAGGTTAAGGATGTGGTTTTTGGTTCTTGGTTTACCAAACCGGATGAAAATCAACCGTCAGAAGGTGGGGAACAGGTCCCCAAGAACTCTGGTGCTGTGGACGTGGATCAGGCGGTGAACCAAGCCGCGGATGCAAGACGACTCCATGAGTCATGTAATTGA 1560 0.4417 MHHKVNLERPMGLEEDPHAPRSSPLSHAHANYQTKVTDPTGAGGGEIDITPVERSLERMNIQNEPRADQESKVLPTISETQYPSHLGGLGHYNHRFSPELSTATKTPFPTADKSHYQHLPHLSGEIKTQYPSAGSHDQFVPEFSHTHCPPIKSHDQNLTQESTVQYPSTESHNQFSAETIPRSSNIYEQNPLQEPASDTTKARFEEQTQPPYKAMEKPSSQSSYTDKISSATSAIADKAITAKNAVASKLGYGEKDDKTKCHEENISSDKPSNQSSYTEKISSATSAIADKAVSAKNTVASKLGYGDKGDSHEETQGENAAATSTTEYGKRIAQSLTDKLAPVYGKVAGVGSAVKSKVPGTSTGSENDRGVSVKDYFAEKLRPGDEDRALSEVISETLHHKRNKEEENVVHKRGEEEEEEHERRKKIPMGKVTESEEVKRRLGVGNEETERYEESYVNSPGKSVVDKVKDVVFGSWFTKPDENQPSEGGEQVPKNSGAVDVDQAVNQAADARRLHESCN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03823 519 MobiDBLite consensus disorder prediction 254 278 - -
Aip05g03823 519 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 256 504 - -
Aip05g03823 519 MobiDBLite consensus disorder prediction 1 52 - -
Aip05g03823 519 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 3 264 IPR037491 GO:0009737
Aip05g03823 519 MobiDBLite consensus disorder prediction 395 442 - -
Aip05g03823 519 MobiDBLite consensus disorder prediction 190 206 - -
Aip05g03823 519 Pfam CAP160 repeat 228 253 IPR012418 -
Aip05g03823 519 Pfam CAP160 repeat 281 307 IPR012418 -
Aip05g03823 519 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 256 504 IPR037491 GO:0009737
Aip05g03823 519 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 3 264 - -
Aip05g03823 519 MobiDBLite consensus disorder prediction 190 225 - -
Aip05g03823 519 MobiDBLite consensus disorder prediction 476 502 - -
Aip05g03823 519 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g03823 519 MobiDBLite consensus disorder prediction 303 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03823 Aip-Chr5 146452885 146456039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03823 - - ahf:112802849 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03823 05 146452885 146456039 Aip05g03823 05 146452885 146456039 ECH