Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03822 ATGCGAACTCGCTTTCTGAACAACGACTACTTCGCTCTCCCTCCGTCGCAACGGTTCCTCCACCTCCCCGTCCCTCGCCTCCACGCGCCGCCTACATCTGCCGTGCACATCCTGCGATTTGACTCCACGCTCCCTGTCTCCCACCACATTGAACCACTGGCGATCGCCGGCGCTCTCTCCACCTTCCTCTCCTCCGTGCTACCTCACAAAATCCATCTCGAACTTCTCGATCTCAAAGATCCAGCTGCTGTTCCGTCTCCACCTCGAGATCGAGATCGCTCCTCGTCATTCAGCTGCGGAAGCTATGAAGATCGGAATCCCCAGGAGACTAAAAGAATTGATTGTAGTGATAAGAGCACGAACGCGTACAAAGTGATTCAATTCGAAACACCTGAGCTAGATGCACTATTGAACACTGGTTGCTTCACTGAGAGGGAGTGGGTGCAAATGCTGGATCAAATGCCGGAGGTTGAAAATTGCCTGGAAATGTTCAAGCCTGAGCCATCAATGCAGTTTCCTTACGAGGCTCTAGAAGCAGTACCTCGTGCTGAAAATGCTATTTCAGAGTACCTAAAAGTGGAGGATGCATATTCTTTTGAAGATAACATTTCTGCTCGTCACCCTTCGCACTCAGGCCAAAACATGTTTCTGAATTTAGAAGTGGACGAAGAAAGTTTGGGAATTCCCTCGTGCTTATCTCTGATAGAAATTCTTGGCACGTACTTTGATTTCACCAAATCTCTTAATTTTGATGAAGAGTGCCAATCCATCACGGATGACAAATCTATGAGTTATAATATGGTGAAACTTTTCTCTGATGAGTGCACATCAAAGCAAAGCCTGGTGTTATCACCCATGTCACCAGAGAGTGATCTTATAAACATGTTGGAAACTGAATATTTTGGTTCCCTGGAGGGTACATCTCAGGCCGATTTAAATTTGTTCATGAATCTAGTAACGTTTCAAGAATTTGTGTTCCTTGATGAGGATTTCACTCAAACCATTGAAGCCTTCTATCACAAATCATCATCAGATATTCTAGAATCAACTAACTGGATGTTCGAGAAAGAGTTTAACTTAAAGAATTTTGATGAATTGATTGTCAGCAATGAGATGGCACTAATGGATGACAAATTCAAATCATTGCCTGTACCTGTTATCTCTGATTACAAAAAGCTTATAGCTCTGCATGATATCATTCAAGAACTTTTTTCCAACTTGAAGACCCGTCCCCTATCTGCATCTGATGGAATATACTTAAACTGGGATCTACTAGAGGAAGATGAATGCAATTACAAAATTTCTAGTTGGCATCAGAACATATGGGCCAAGATAGATCTGAAGAACCAAGGTTTCATAGAGAAATTTTGTGAGGATGGAAAATCGGTATTTGATCTTGTTTTATCTGAGGATACTACAGATGATCATGACAATAATCAAAGTGAAGAGTTGCAGAAGTTGCTTTCTGATAATATGTCTCTGCTTGACATTAGTCTTACAGAATTTGCTTCAGTCAAACAACTGGAACGTGGATCTTCTACAAAAGAGAGTCAAGAGCCATTACCTGAAAAAGGTGCTGAGAGGGCTTCTAGGTTATTTAAGTCTGTGTCAGAGATCAGCAGTCTTGATTACTTCTTAAACCCTCAAAAAGCAACTATTAGCCGGGAATGTAATTTTGCAGTAGAGTCTACAGATGCTAATGCTCGGGTTCCAGAATTTACACCTGCCAACATAGAATTTTCACGTGTTGCAGCTGAAGCAGATGATTTTGTGCCACTAATAGCTGCATTGAAAACTGACCATGGTCATCAAGGCATGGAGCTTTTTACCGGATCAGTTATTATTGTGAATACTCAAAACGTAGATAAGGAAATGATATTCTCTAGAAGAAGCTCTTACCAAGTAATTCTTGGGATGGAGAAAGGAGGAATTCAAGTTGTTGAACGTGATTTGGATTTACCTGTAGATATCATACTAAGTTCTGCAATTTGCTTGGCATGGTACGATAGTACAAATCTTGCGATGAAAGCAACACCAGTCACTGAAGCATCTTCAAGCTTGCATTTATATATTGAGAATATTGCAGCAGATGTTCTGACAATGCTGAGTTTTTACTTCCGCGGCTGCTTTTTGGTCTTTGAGGGAGAATATAACTTCCTTTCAACTGTAATGGAATTCTCAGATGCACTTTATGCTGCAGCATCAAGCTTGGGAATTGATTTACAGATCTTCTTCTCTTACTCACCAGAATTGACAACCGAAGTTATAATAAGCTGCATTAAGAGTGTCACCAAATCGAAAATGGGTCTGTATCCTAAAATGACTGAGTCAGTAACTCTTGCAGAATCATTTCTTACACAATTTCCTGGAGTAAATCCTTTAACGGCACACTGTATACTATCTTCAGGGGTCACGCTCAATGAGTTTCTTAGTTGGTCACATGAACAAAGGATGCATGTTTTAGAAAAGTACAACGTTCCAGAAGAAAGTATTTCTCTGTTCAGTGTTTTCTGTAAATATGGAGAGCGGGAGGATTCAAAATCCATAATGACAGACTGCTCCTCTTCGGTGTCATCAGAACCAGACTCAGATAAGTGTTCTCTATATCGTCAAGTTGACAATCAAAGAAAAAGGAAAACTCATGCAAGTAGTCACCAGATGGATGAACTACGTCTTGAGGAGTTGTTGCAATTCAACACATTAAATCCAGTAGTTGAGGCTGTTCCGGATTCCTCTGCTATGCCAAAATTCTGTGATCTTGGTATGCCAAAAGATGCTGGGAGATCCAGTGAGTTGGCAGAGGCTAGTTTACCTATGGGAGAATTTTTCGAGCCAAAGCAAAGATCCAGCATGACTACAATGAGAAACCCTGCCAGCTTTCCCCAGTCTTCGTGTGATCTATGGAACTTCAAAGATGAAGAACTGCAGGTGGAACAGCCCCATTCAACTTTAAAAAATAGAGAGTTTGCTCAAAATGATATGCTGGACACTGCAACGATCAGCACAAAACTGAATTGGCATAAACCAAGTGATTCTAAGAAGATGCATGAAGACATTAGAGGTGAGGTGGTTAACTTCACTGATTTTCCCTTATTAGATAAAGACTTCTCTGTTTCGGATTTCATGAAGTTCCCAAGTTTGACGATTGAAACCGAGAAAGATCACATAAGAAAGAACAAAATTGCAAGGAGATTGTCATTCGATGATAACTTTCACCCTGAAGGCAACCCATCAATGGCATGTAGATCTTCAAAAAATACACCACAGGAAGTTGATAACTATGCTGAACCAGATTTTGGGAAAGATGTACTACCTCTTGGTTTCAAGCATGGTCAAAACATTCTCGAAGAGGGTTTAGCTCAGACATCTATGGGAAACCTACAAAGATTACCCTTCCAGGAGGAAATGTCACATTTGGGGAGAACTCCACTTTCACGCGCACGCTGGTCAACTAATCCAGTGAATTCACCTTGGACAACAGAATTTATGAACAGGTTTAAAGAGAAGAGCAAATTGCGTCAAAAATCGTTTTCAAGTGGGAAATCTGCTCCTTGTTTTGGGTACTCAGGGAACACGTCCACCGTTTCTAAGAGAAGTCCTTCAATAATTGAGTTGTTCAAGTACCAATCCGGTGAGACTCTCGGAAACATTCAACAGAAAAGGCAGAAGCAATCTGGGCAATCTTCAGAACCAGTCAAGAGAGGAAAATATTCTGCTTCGCTACCCTCACATACTCCAAATGATAAGATATCAACCAAGACACTTACTTTTGGGAGGAAAGGAAGTGGAAGCCAAACTAAGCTGGTCTGGAGTGATAGAGATCAGTCACGGTATCGGGCACAATAA 3846 0.4126 MRTRFLNNDYFALPPSQRFLHLPVPRLHAPPTSAVHILRFDSTLPVSHHIEPLAIAGALSTFLSSVLPHKIHLELLDLKDPAAVPSPPRDRDRSSSFSCGSYEDRNPQETKRIDCSDKSTNAYKVIQFETPELDALLNTGCFTEREWVQMLDQMPEVENCLEMFKPEPSMQFPYEALEAVPRAENAISEYLKVEDAYSFEDNISARHPSHSGQNMFLNLEVDEESLGIPSCLSLIEILGTYFDFTKSLNFDEECQSITDDKSMSYNMVKLFSDECTSKQSLVLSPMSPESDLINMLETEYFGSLEGTSQADLNLFMNLVTFQEFVFLDEDFTQTIEAFYHKSSSDILESTNWMFEKEFNLKNFDELIVSNEMALMDDKFKSLPVPVISDYKKLIALHDIIQELFSNLKTRPLSASDGIYLNWDLLEEDECNYKISSWHQNIWAKIDLKNQGFIEKFCEDGKSVFDLVLSEDTTDDHDNNQSEELQKLLSDNMSLLDISLTEFASVKQLERGSSTKESQEPLPEKGAERASRLFKSVSEISSLDYFLNPQKATISRECNFAVESTDANARVPEFTPANIEFSRVAAEADDFVPLIAALKTDHGHQGMELFTGSVIIVNTQNVDKEMIFSRRSSYQVILGMEKGGIQVVERDLDLPVDIILSSAICLAWYDSTNLAMKATPVTEASSSLHLYIENIAADVLTMLSFYFRGCFLVFEGEYNFLSTVMEFSDALYAAASSLGIDLQIFFSYSPELTTEVIISCIKSVTKSKMGLYPKMTESVTLAESFLTQFPGVNPLTAHCILSSGVTLNEFLSWSHEQRMHVLEKYNVPEESISLFSVFCKYGEREDSKSIMTDCSSSVSSEPDSDKCSLYRQVDNQRKRKTHASSHQMDELRLEELLQFNTLNPVVEAVPDSSAMPKFCDLGMPKDAGRSSELAEASLPMGEFFEPKQRSSMTTMRNPASFPQSSCDLWNFKDEELQVEQPHSTLKNREFAQNDMLDTATISTKLNWHKPSDSKKMHEDIRGEVVNFTDFPLLDKDFSVSDFMKFPSLTIETEKDHIRKNKIARRLSFDDNFHPEGNPSMACRSSKNTPQEVDNYAEPDFGKDVLPLGFKHGQNILEEGLAQTSMGNLQRLPFQEEMSHLGRTPLSRARWSTNPVNSPWTTEFMNRFKEKSKLRQKSFSSGKSAPCFGYSGNTSTVSKRSPSIIELFKYQSGETLGNIQQKRQKQSGQSSEPVKRGKYSASLPSHTPNDKISTKTLTFGRKGSGSQTKLVWSDRDQSRYRAQ 1281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03822 1281 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 575 - -
Aip05g03822 1281 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 586 1275 - -
Aip05g03822 1281 MobiDBLite consensus disorder prediction 82 113 - -
Aip05g03822 1281 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 586 1275 IPR038824 GO:0007131
Aip05g03822 1281 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 575 IPR038824 GO:0007131
Aip05g03822 1281 MobiDBLite consensus disorder prediction 1069 1089 - -
Aip05g03822 1281 MobiDBLite consensus disorder prediction 1214 1281 - -
Aip05g03822 1281 MobiDBLite consensus disorder prediction 1214 1271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03822 Aip-Chr5 146446405 146451953 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03822 - - adu:107490869 2415.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03822 05 146446405 146451953 Aip05g03822 05 146446405 146451953 ECH