Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03821 ATGTTCAGGTCATGGAGCAAGAAGAACAAAATAAAAGCTGTATTCAAACTGCAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGCCGGCACTGATGATAGCTTTGGTTCCAGATGGTGCTGGGAAGCCAACAGTTAAACTAGAGAAAGTTGCTATCCAGGGTGGATCCTGTTTATGGGATAAACCAATTTTTGAAACAGTTAAATTCGTTAGAGACACAAAATCAGGAAAACTACATGAAAAAATCTATCATTTCATCGTTTCAACTGGATCTTCAAAGTCTGGATTTCTTGGAGAAGCCTCAGTTGACTTCGCTGATTTTGCTGCAGAAACTGAGCCACTGACTATATCTCTACCCTTGAAGTTTGCCAATTCAGGAGCGATTCTACATTTTATTTATTTTGCTTTCTTGATTTTATATCTGATGTGCTTGCTCACTTTTCACCTCAGTTTCAGAAATGGAGTAGACGGTGGAGGTGGAAGCTTGAAACACCAGCAGAGCAATTGCAGTACAGATGACAGTTCCTATAATGCTGAAGATTCTTCTAGGCTATTACTATTACCACCGCCCATCAGAACGACTTCAATGCCATCAAATGGAAGAGTTGAAGTCCCTGCCTCAGAAACCCATAGGCATAGGAGGTCAAACACAGAGGTGTCAACTGGTTCAGCGTCAGATGGGAATTTGGGTGACTGGACTAACAGCTTGGAAGATAATCTTCCCAGAGAAAGATTGCTAATAGGGCCTCCTGATAGTACCACTGAAAACCTCAAGACAGAAATTGCTTCTCTAAAGAGACAAGTAGAAGTATCAGAACAAGAGCATCAATCACTTCAGAAGCAGTTAGAGAAAGAAAGCATTCGGGGACAAAATATGGCAAGACAGATAATCCTCCTAAGAGAGGAGAGAAATATGCTCAAAACAAAATATGAGCAGCTCAATTCCCAGCAGAACCTTGATAATGAGAACAAAGCCTCAAAATCCTTGCCGTCTGAGATTGAAGATACTAGGCTTCAGTTAGAAGCATTAAAGGAAGAGCTTATACATGAAAAATCTTTTAGTGCCAGTCTTCGCTCACAGCTCCAGAAGACACAAGATTCAAACTCTGAACTGCTTTCGGCAGTGAGGGAGCTTGAAGCAGTGCTGGAACTAAAGAATAAGGAAATCTTGGACCAGATTGACAAGCACAGTGATTGGACAGAAATAGACCTCTTGAGGCAGAAAATTGCAGATCAGAATCGTGAAATCGACACTTATAGTCAGCAACTTGATGAGTTAAACGAGCATATAGAAGTGCTCACTTCGGACTACGAGCTATTGAAGAGGGAAAACCTGGATATCTGTTTGAGATTAAAGAAAGTAGAAGCACAACATAAGATGTTACAAAATAAACATTCAGCTTCGTTGACTGCCATAGAACAACTTGAATCACAGGTAGAGATATTAGAAGAAAAGATAAAGAATCGGGAAGAGGAATTTTCAGAGTCTTTGGTCTACATCAATGAGCTTGAAAATCAAGTCAATAATTTGGAGAGAGAACTGCAAACACAGGCAGACAAGTTTGAAGAAGATCTCCATTCTTTGAAATGTGCGAAGATTGAGCAAGAAGAACAGGCCATGAAAGCTGAGGAGGCCTTGAGAATGATGACACGCAATAATGCTCTCATATCTGAGCGTTTTCAGGATGAATTTCGAAGGCTTTCAGTTGAAATGGCATCGAAAGTAGAAGAAAATGAAAAGATGATCGTTAAAGCCAATGCAGAAGCTGATGAATTGCAGAAGCAGAACAAACTTATGGAAGAAACACTCCAGAAATGCAATCAAGAGCTCAGGCTAATTACAAACCAGAACGATTTGAAACTGCAAGAGCTCTTGAACCAAATAAACTCAAAAGAAAAAACAGTAGAGATGTTGACACAAGAACTTGAGGGTAAATCTAAACAACTTGAAAATGTGCAAAGCCAAAAGGATGAAAAGGATCACGCATTATCAAAGCAAATTCAGGTTCTTAGGATTGAAATTAAGAAGCTGATGGTAGAAAAGCACGCATTTTCTAAAGCAAAGCCAACAGAGCAAATGACCGAGGTGGTATTGCAAGGGAACCAAGATGTGGATAAGATACTTGGTACCCTGATGACAGAAGTGGAAATCTTGAAGAACCATCACAATGAATTGACAAATATCCTGCAGAAAGAACATGCTGAGAAAGAAAATATGTGCAAAACAATATCTCAACTAGAAGGAGAGCTTAAGAAGAAAGAAGCAGAATTAAGCATTATGGAAAAGAAGCAGAGGAATAACAAAAGACAACCAGCAGCAGCAAACATGAATATGACTCCAAGAGACAGCGAGCGTTGTGGTGCATCTCCTTCCAATGAGGAACAGCTGAAGACATCAAATTCAGAATGGCACAAGGGCATGGATGCTGGAAATACTGCTGATGGGTTGGAAGAAAAAGGAATAGGCAATTTGGCTGAGAAAAAAGTTTGCCAAGCACTGCACAGAAGTGATGCGAAAACTTGCTTGGCAAATGAGGTGATTCTCTTCAATCATGATCATAGTGGTCGGTGCCACACAAATGAATTATTGAATGAAGTGGCACTCCTAAAGGAAAGGAATAAATATATGGAAAATGAGCTGAAAGAATTAGAAGAAAGGTATTCGGATATTAGTCTAAAATTTGCAGAGGTAGAGGGAGAAAGACAACAACTTGTTATGGCTCTACGTAGTATCAAGAATGGTAAGAACTTGAATTCTTAA 2763 0.3967 MFRSWSKKNKIKAVFKLQFQATQVPKMKKPALMIALVPDGAGKPTVKLEKVAIQGGSCLWDKPIFETVKFVRDTKSGKLHEKIYHFIVSTGSSKSGFLGEASVDFADFAAETEPLTISLPLKFANSGAILHFIYFAFLILYLMCLLTFHLSFRNGVDGGGGSLKHQQSNCSTDDSSYNAEDSSRLLLLPPPIRTTSMPSNGRVEVPASETHRHRRSNTEVSTGSASDGNLGDWTNSLEDNLPRERLLIGPPDSTTENLKTEIASLKRQVEVSEQEHQSLQKQLEKESIRGQNMARQIILLREERNMLKTKYEQLNSQQNLDNENKASKSLPSEIEDTRLQLEALKEELIHEKSFSASLRSQLQKTQDSNSELLSAVRELEAVLELKNKEILDQIDKHSDWTEIDLLRQKIADQNREIDTYSQQLDELNEHIEVLTSDYELLKRENLDICLRLKKVEAQHKMLQNKHSASLTAIEQLESQVEILEEKIKNREEEFSESLVYINELENQVNNLERELQTQADKFEEDLHSLKCAKIEQEEQAMKAEEALRMMTRNNALISERFQDEFRRLSVEMASKVEENEKMIVKANAEADELQKQNKLMEETLQKCNQELRLITNQNDLKLQELLNQINSKEKTVEMLTQELEGKSKQLENVQSQKDEKDHALSKQIQVLRIEIKKLMVEKHAFSKAKPTEQMTEVVLQGNQDVDKILGTLMTEVEILKNHHNELTNILQKEHAEKENMCKTISQLEGELKKKEAELSIMEKKQRNNKRQPAAANMNMTPRDSERCGASPSNEEQLKTSNSEWHKGMDAGNTADGLEEKGIGNLAEKKVCQALHRSDAKTCLANEVILFNHDHSGRCHTNELLNEVALLKERNKYMENELKELEERYSDISLKFAEVEGERQQLVMALRSIKNGKNLNS 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03821 920 Coils Coil 362 389 - -
Aip05g03821 920 Coils Coil 466 554 - -
Aip05g03821 920 MobiDBLite consensus disorder prediction 770 807 - -
Aip05g03821 920 Coils Coil 860 901 - -
Aip05g03821 920 MobiDBLite consensus disorder prediction 764 807 - -
Aip05g03821 920 Coils Coil 622 656 - -
Aip05g03821 920 MobiDBLite consensus disorder prediction 219 236 - -
Aip05g03821 920 PANTHER BNAC08G20130D PROTEIN 1 916 - -
Aip05g03821 920 Coils Coil 730 771 - -
Aip05g03821 920 Coils Coil 403 444 - -
Aip05g03821 920 Coils Coil 576 617 - -
Aip05g03821 920 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 132 IPR019448 -
Aip05g03821 920 Coils Coil 297 317 - -
Aip05g03821 920 MobiDBLite consensus disorder prediction 161 236 - -
Aip05g03821 920 MobiDBLite consensus disorder prediction 161 182 - -
Aip05g03821 920 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Aip05g03821 920 Coils Coil 255 289 - -
Aip05g03821 920 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 916 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03821 Aip-Chr5 146441556 146445493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03821 - - gmx:100800902 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03821 05 146441556 146445493 Aip09g04013 09 146491116 146495701 ECH
Aip05g03821 05 146441556 146445493 Aip05g03821 05 146441556 146445493 ECH
Aip05g03821 05 146441556 146445493 Aip09g04013 09 146491116 146495701 PCT