Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03815 ATGGCTCTGCAACTGTGGGAGACTTTGAAGGAAGCAATAGTGGCTTACACTGGCCTCTCTCCACCCACCTTCTTCACTCTTTTGGCACTCTTCCTTGCCATTTACTACGTCGTTTCGGGCCTCTTTGGTTCCTCCGCTAATAACACCCATGGAGCCACCAGGGATTTCGAGCCGCAGATGCAGCCTCTGAAACCGCCGGTTCAGCTCGGTGAGGTCACGGAGGAGGAGCTCAAGGCCTATGATGGCACTGATCCTGAGAAGCCTCTGCTCATGGCCATCAAGGGTGAGATCTATGATGTTTCACAGAGCAGGATGTTTTATGGACCTGGTGGACCATATGCTCTATTTGCCGGCAAGGATGCTAGCAGAGCGTTAGCAAAAATGTCTTTCGAAGAGAAAGACCTAACTGGTGATATTTCTGGTCTTGGACCATTTGAGCTTGAGGCGTTGCAAGACTGGGAATATAAGTTTATGAGCAAGTATGTTAAAGTTGGAACCATCAAAAAGGAAGTTCCAGTGACCGAAGGAGAATTCAAAGGTGAATCATCAGAATCCTCTCCCCAAGATGGTGATGCTCCCAAACCTGCTATTGAAGAAGGTGGCTCCTCAGAAAATGTAGCTGTTAAAAGTGAGGAAAACCCTTCACATGTTGATGCAGATAAAGAGTAA 669 0.4768 MALQLWETLKEAIVAYTGLSPPTFFTLLALFLAIYYVVSGLFGSSANNTHGATRDFEPQMQPLKPPVQLGEVTEEELKAYDGTDPEKPLLMAIKGEIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGTIKKEVPVTEGEFKGESSESSPQDGDAPKPAIEEGGSSENVAVKSEENPSHVDADKE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03815 222 Gene3D - 70 168 IPR036400 -
Aip05g03815 222 Pfam Cytochrome b5-like Heme/Steroid binding domain 73 167 IPR001199 -
Aip05g03815 222 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 1 217 - -
Aip05g03815 222 MobiDBLite consensus disorder prediction 173 222 - -
Aip05g03815 222 PANTHER CYTOCHROME B5-LIKE HEME/STEROID-BINDING DOMAIN PROTEIN 1 217 - -
Aip05g03815 222 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 65 168 IPR036400 -
Aip05g03815 222 SMART Cyt_b5_2 72 168 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03815 Aip-Chr5 146394283 146396600 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03815 K17278 - gmx:100807452 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03815 05 146394283 146396600 Aip05g03815 05 146394283 146396600 ECH
Aip05g03815 05 146394283 146396600 Aip09g04003 09 146447513 146448852 PCT