Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03813 ATGAAAAAGACCAGAATCACAACGAAGGGCGACACAGTTAGGAGAGATTCCTACTACATAGATCCTGCAAGCGGCTATGTGTTCCGCTCGCTAAGAGACGTTGATCGTTATCTTGAATCTGGGGAAATAGGAAGGAACGCGTTCAAGCCGAAAGACAACAGTGATACAGAGTTAAAAGCTGACAAGTTCTCTCCAGTATCGACCACAAAACCAACTGTATCTGTTAGCATGGGTTTGAACTCAGATTCAGACAGGATATCCAATGATCAACAGGATCAAAAGCCTGTGTGTTCAGCAGAATATGCATCTACACCAATCTCTGAAAATACTTCAGCTCAGTGCGTGATGGGAACAAAATCGACCACCTTAGGCTCGGATCAGATAGAAGGGAAGGCTAGTGAAGAAGATTCTCAAGCAAAGCAACTTCCCCAAAATGAACAAATGGAAAATGAAAAATCTCAAAAGCGACAAAGGCGTAAAAAGGAGATCAATCTTCCTCGCCGTTCCTCAAAGCGCCTTGCTGGAATTCAGCTTGATCCAGTTCCAGAACTTGTAACAAGAAGCCGAGCACGCCGAGCTGCAGTTAAACAATCAGGCCAGGGAGAAACCATCAGAAATGAGGATAAATCCTCTAACAGCTTGCCTAATGCCGCAGCGAAAAGGATGAATGTGACTGATGGTGGATCAGAAACAAAGTGCAAGTCTGAGAGTGCAGCAAACATGCTACAGTCAACTAAGTTCTCTACTCCAGAAAGGCTTCCCAACAAGACTACAGAAGAGGATGGAAGCAACAAGGATCAAGAATGCTTCTCATTTTGGCCTCAAGAGAACAATGCTACTATGAAAGATCCTGTGCTTGATTACTCCCATGAGTTTCCTCTTAAAGAACTGCTACAGGACCCATGCATTGCATTTGCAATACAAACTCTCACCGGCGAAACATTCGAAATGCAAGTATCCGGCGAATCAAGTGAGCATTCTGAAGCTCTTACTGCAAATATGGGTGGTGATGACAAGGGAGGGTGCAATGTGTTCTCACATCCAGAAAACTATGCTATTATACCGCAACAACATGCCGGTGCAGCCGAAACAGCAATCAAGACTAATGAAAACCAAACAGGATCATCATCTTCTGAAAAGGAACTTGATGTTTCATGGATGGATCCATGCATTGAATTTGCAATCAAAACTCTCACTGGCTCCATCCCATTAGATTCAGAGCAGAATCCCAAGAACTGCATTCAACAGCAGCTTAGCTCATCAAACACAAATCCCGGTGACATGGCCTATAAACAGGAACCAATGTTTAAAGAGTCTTTTGTGGATCCAGCAGCATCATCAACACACAAGAAATGTTGA 1359 0.4364 MKKTRITTKGDTVRRDSYYIDPASGYVFRSLRDVDRYLESGEIGRNAFKPKDNSDTELKADKFSPVSTTKPTVSVSMGLNSDSDRISNDQQDQKPVCSAEYASTPISENTSAQCVMGTKSTTLGSDQIEGKASEEDSQAKQLPQNEQMENEKSQKRQRRKKEINLPRRSSKRLAGIQLDPVPELVTRSRARRAAVKQSGQGETIRNEDKSSNSLPNAAAKRMNVTDGGSETKCKSESAANMLQSTKFSTPERLPNKTTEEDGSNKDQECFSFWPQENNATMKDPVLDYSHEFPLKELLQDPCIAFAIQTLTGETFEMQVSGESSEHSEALTANMGGDDKGGCNVFSHPENYAIIPQQHAGAAETAIKTNENQTGSSSSEKELDVSWMDPCIEFAIKTLTGSIPLDSEQNPKNCIQQQLSSSNTNPGDMAYKQEPMFKESFVDPAASSTHKKC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03813 452 SUPERFAMILY DNA-binding domain 3 46 IPR016177 GO:0003677
Aip05g03813 452 MobiDBLite consensus disorder prediction 43 99 - -
Aip05g03813 452 MobiDBLite consensus disorder prediction 228 252 - -
Aip05g03813 452 PANTHER OS04G0193200 PROTEIN 2 438 IPR038945 -
Aip05g03813 452 MobiDBLite consensus disorder prediction 123 269 - -
Aip05g03813 452 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 63 IPR001739 GO:0003677
Aip05g03813 452 MobiDBLite consensus disorder prediction 43 59 - -
Aip05g03813 452 MobiDBLite consensus disorder prediction 60 99 - -
Aip05g03813 452 Coils Coil 145 165 - -
Aip05g03813 452 Gene3D - 1 96 - -
Aip05g03813 452 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 2 438 - -
Aip05g03813 452 MobiDBLite consensus disorder prediction 199 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03813 Aip-Chr5 146380391 146384667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03813 - - aip:107619103 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03813 05 146380391 146384667 Aip05g03813 05 146380391 146384667 ECH