Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03797 ATGATTTACAGAGAGAGACACTGCCCTTCGAAGAAGGAAGTCTTGAAGTGTCGCATTCCGGCGCCGCACGGTTACAAGAACCCGTTTCCATGGCCCTCGAGCAGGGACGTGGCATGGTACGCCAACGTGCCTCACAGAGAGCTCACGGTGGAGAAGGCCGTTCAGAACTGGATCCGTTACGACGGCGACAAGTTCAGGTTCCCCGGCGGCGGCACCATGTTCCCCAACGGCGCCGATAAGTACATTGACGACATTGGAAAGTTGATTGATCTCAAACATGGTTCCGTTCGCACCGCCGTTGATACTGGCTGTGGGGTTGCAAGTTGGGGAGCATATCTTCTATCCCGTGACATAATAACAATGTCAATAGCACCAAGAGACACACACGAAGCACAAGTTCAGTTTGCTCTTGAAAGAGGTGTTCCCGCCATTATTGGTGTTCTTGCATCTAAGAGGCTCCCATTTCCCTCTAGAGCTTTTGACATGGCACATTGCTCTCGCTGCCTAATTCCATGGGCTCAATATGATGGGGTTTATCTAAATGAAGTTGATCGGATTCTGCGGCCCGGAGGCTATTGGATCCTATCCGGGCCACCCATCAATTGGAAGAGATATTGGAGAGGTTGGGAAAGAACAAAGGAGGATCTGAATGAAGAGCAGACCAAAATTGAGAAGGTGGCTCAAAGTCTATGTTGGAAGAAGCTTGTAGAGAAGGGTGATATTGCTATTTGGCAGAAACCCAAACACCATTTGAAATGCTCTCAAAATAGTAGGCCTTTTTGCCACCCACAAGATAACCCTGACAAGGCATGGTACACTGACATGAAGACATGTTTGAGTCGTCTGCCAGAAGTGTCAGACAATGATGAAACTGCAGGAGGGGCATTGGAGAATTGGCCAGAGAGGCTAACAGCCACCCCACCAAGGATTTACATGGAGACCATAAAAGGGGTTACACCTTCAACCTTCATAAAGGACAATCAATTATGGAAGAAAAGGATATCATATTACAAGAAAGTTAACAGTCAGCTAGGTAAAGCTGGGAGATACAGAAACCTTCTTGACATGAATGCTTACTTGGGTGGATTTGCTGCTTCTCTTGTTGAGTACCCTGTTTGGGTCATGAATGTGGTTCCTGTTCAAGCCAAGGTTGACACACTTGGAGCAATTTATGAAAGGGGATTGATTGGAACATACCATAATTGGTGTGAAGCAATGTCCACTTATCCTAGAACTTATGATTTAATTCATGCTGATTCAGTCTTCAGCCTTTACAACCAAAGATGTGAATTAGAAGACATTCTGCTAGAAATGGATAGGATTCTTAGGCCAGAAGGAAGTGTAATAATCAGAGATGATGTTGATATATTAGTAAAAGTAAAGAGTATAGTCAACGGTTTGAATTGGGAAAGTCAAATTGTTGACCATGAAGATGGGCCTCTTGAAAGAGAGAAACTTTTATTTGCTGTGAAGAATTATTGGACAGCTCCTAAAGCTTCAAACAGTAGTTAG 1512 0.4484 MIYRERHCPSKKEVLKCRIPAPHGYKNPFPWPSSRDVAWYANVPHRELTVEKAVQNWIRYDGDKFRFPGGGTMFPNGADKYIDDIGKLIDLKHGSVRTAVDTGCGVASWGAYLLSRDIITMSIAPRDTHEAQVQFALERGVPAIIGVLASKRLPFPSRAFDMAHCSRCLIPWAQYDGVYLNEVDRILRPGGYWILSGPPINWKRYWRGWERTKEDLNEEQTKIEKVAQSLCWKKLVEKGDIAIWQKPKHHLKCSQNSRPFCHPQDNPDKAWYTDMKTCLSRLPEVSDNDETAGGALENWPERLTATPPRIYMETIKGVTPSTFIKDNQLWKKRISYYKKVNSQLGKAGRYRNLLDMNAYLGGFAASLVEYPVWVMNVVPVQAKVDTLGAIYERGLIGTYHNWCEAMSTYPRTYDLIHADSVFSLYNQRCELEDILLEMDRILRPEGSVIIRDDVDILVKVKSIVNGLNWESQIVDHEDGPLEREKLLFAVKNYWTAPKASNSS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03797 503 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 330 454 IPR029063 -
Aip05g03797 503 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 499 IPR004159 GO:0008168
Aip05g03797 503 PANTHER METHYLTRANSFERASE PMT15-RELATED 1 499 - -
Aip05g03797 503 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 211 IPR029063 -
Aip05g03797 503 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 1 491 IPR004159 GO:0008168
Aip05g03797 503 Gene3D Vaccinia Virus protein VP39 60 244 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03797 Aip-Chr5 146205440 146211615 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03797 - - gmx:100777356 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03797 05 146205440 146211615 Aip05g03797 05 146205440 146211615 ECH