Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03781 ATGGGGGCTGCTAGTTCCTCAATTAGTGTAGCAGAAATTGAGGATGTTGTTTCAGAATCAAGATCATCAACAGGGCTTGGTGACATTCCAGAGAGCTGCATCTCATTCATGATGATGAGTTTTGATCCAAAAGAGATTTGCCAATTGGCTAAAGTGAACAAAACTTTTCATAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAGTTGCCACAATCATATGAGTTCCTTCTCAATAAGATTCTTGGTGATAACAAAGAGGATCTAATTAGAATCATGTCCAAGAAAGAGGTTTATGCCAAACTATGTCGACCTAATTTCTTTGATGGTGGCACCAAAGAAGTTTGGTTGGATAGAAGCAGTGGACAAGTTTGTTTGTTCATCTCATCAAAGTCTTTCAAGATTACAGGAATTGATGACAGAAGATATTGGAATAATATTCCAACTGAAGAATCCAGGTTTAAAAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGTTGGGGGAACTAGACTTTGAATTTCCAAGAGGGAAATATAGCGTTTTTTTCAGGCTTCATTTGGGAAAGACCTCAAACAGATTGGGCCGAAGAGTGTGCAACCTGGCCCAAGTCCATGGTTGGGACATCAAGCCCGTTAGATTTCAACTATCCACATCTGATGGCCAGAATTCACTTTCCCAGTGTTACTTGAGTGGGCCAGGAGAGTGGACCCATTATCATGTTGGGGATTTTGTCATTGATAAGCCCAATGGGCCCACAACCATCAAGTTTTCCCTGGCCCAAATTGATTGCACTCACACAAAAGGCGGGCTTTGCATAGATGGGGCAGTGATTTGCCCAACCCAGAATACAAAACAATTTTGA 870 0.4138 MGAASSSISVAEIEDVVSESRSSTGLGDIPESCISFMMMSFDPKEICQLAKVNKTFHRASSADFVWESKLPQSYEFLLNKILGDNKEDLIRIMSKKEVYAKLCRPNFFDGGTKEVWLDRSSGQVCLFISSKSFKITGIDDRRYWNNIPTEESRFKSVAYLQQMWWVEVLGELDFEFPRGKYSVFFRLHLGKTSNRLGRRVCNLAQVHGWDIKPVRFQLSTSDGQNSLSQCYLSGPGEWTHYHVGDFVIDKPNGPTTIKFSLAQIDCTHTKGGLCIDGAVICPTQNTKQF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03781 289 PANTHER F-BOX PROTEIN PP2-A15 1 287 - -
Aip05g03781 289 SUPERFAMILY F-box domain 13 103 IPR036047 GO:0005515
Aip05g03781 289 Pfam Phloem protein 2 124 282 IPR025886 -
Aip05g03781 289 PANTHER F-BOX PROTEIN 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03781 Aip-Chr5 145961255 145965898 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03781 - - gmx:100816360 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03781 05 145961255 145965898 Aip09g03991 09 146354735 146358445 ECH
Aip05g03781 05 145961255 145965898 Aip05g03781 05 145961255 145965898 ECH
Aip05g03781 05 145961255 145965898 Aip09g03991 09 146354735 146358445 PCT