Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03711 ATGGCCTTCGATTCGTGGCTCGGTAGGGTAAAAACCGCGCTTTCCAACGGGAAGAATCCCAAGTCAAAACGCGTTGCCGTTTTGTCATTCGAGGTCGCCGGCGTCATGTCGAGGCTCCTTCACCTCTATCAGTCGCTATCCGACGCCGCCGTCGTTCGCCTTCGAAACGATGCCGTTTCTCTTGAGGGTGCATTGAAGCTCGTTTCCAACGACGAGTCGTTCCTCCTCAGACTCGCCCGAGCCGAACTCGCTGAGTCAGTTCGAGTCGCGGCCGGCTCGGTGTCCCGACTCAGCTGCATGTGCAGCGATCCTTTTCTCCGATCGTTCCACCGAGTCTTCACCGAGTTTGCTAACTCGGGCTACGACCCGCACGCGTGGACACTCACCAATCCGAAGGAAATCGAAGCCAAACACAAGAAATTGGAGCGTTACGTGTCACTCACGTCAACGCTTCACAGAGAAATGGAAGAGCTTTCGGTTCTAGAAAGTGCGTTGAGAAAAGCACTTAGCCATAGTAGTAACAACAATAATGGTGAAGCTGAACCTTGTTCAGTTAACAATAAGGATCATCAGAAACTCTGTGATCTTCAGCAAAAGATTTTCTGGCAGAAGCAAGAGGTTAAGGAGTTAAAGGAGAAATCTTTGTGGAATAAAGGTTTCGATGGCGTTGTTTTGTTGCTTGTTAGGTTTGTTTTCACTGTGTTAGCAAGGATTAAGGTTGTGTTTGGAATTGGGCATTGTGTTCCTTATTTGTCTCGTAGTTTATCAGCTTCAGCCACTGTTTTTCCCTCCGATCAAAATCCCAATAGTGAAAATTATGCTATTCATGTTTCTAGGCCGTTCAAAAGTTTGAAGCTTGATGGGAATGGTGATTTGGGGTGTGGTGGTTTTTTTGAGTCTAATTGTAAGTTATTGAAGCCAATGAATGGTACTTTAGGTGCTTCAGCTTTGGCATTTCATTATGCCAATTTGATCATAGTTATGGAGAAGATGATAAAGTCACCACAATTGGTTGGTGTTGAAGCAAGGGATGATTTGTATGCAATGTTGCCAAGTAGCATAAGATCATCACTGAGGTCAAGATTGAAAGGTGTTGGATTCTCTGCTTGTGATCCTGTTCTTGCTGGAGAATGGAGAGAAGCATTGGGGAGGATTCTTGGTTGGATTTCACCATTGGCACATAACATGATTAGGTGGCAGAGTGAGAGGAGCTTTGAGCAGATGAACATGATGGTTCCAAAGACCAATAGTAATGTGTTGTTGTTGCAGACTTTGTTCTTTGCAGACAAAGAGAAGACAGAAGCTGCCATAACTGAGCTGCTTGTTGGTTTGAACTATATTTGGAGGTTTGAGAGAGAAATGACTGCTAAGGCTTTCTTTGAAGGATGCAACAACAGTTTCAATGGCTTGTTAAATGTTAACCATTCAGAAACCCAGTTAAGGACTTGA 1449 0.4486 MAFDSWLGRVKTALSNGKNPKSKRVAVLSFEVAGVMSRLLHLYQSLSDAAVVRLRNDAVSLEGALKLVSNDESFLLRLARAELAESVRVAAGSVSRLSCMCSDPFLRSFHRVFTEFANSGYDPHAWTLTNPKEIEAKHKKLERYVSLTSTLHREMEELSVLESALRKALSHSSNNNNGEAEPCSVNNKDHQKLCDLQQKIFWQKQEVKELKEKSLWNKGFDGVVLLLVRFVFTVLARIKVVFGIGHCVPYLSRSLSASATVFPSDQNPNSENYAIHVSRPFKSLKLDGNGDLGCGGFFESNCKLLKPMNGTLGASALAFHYANLIIVMEKMIKSPQLVGVEARDDLYAMLPSSIRSSLRSRLKGVGFSACDPVLAGEWREALGRILGWISPLAHNMIRWQSERSFEQMNMMVPKTNSNVLLLQTLFFADKEKTEAAITELLVGLNYIWRFEREMTAKAFFEGCNNSFNGLLNVNHSETQLRT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03711 482 Pfam Protein of unknown function (DUF668) 311 398 IPR007700 GO:0045927
Aip05g03711 482 PANTHER BNAC09G50660D PROTEIN 1 474 - -
Aip05g03711 482 Pfam Domain of unknown function (DUF3475) 27 82 IPR021864 GO:0045927
Aip05g03711 482 PANTHER DUF3475 DOMAIN PROTEIN 1 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03711 Aip-Chr5 145095308 145097069 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03711 - - gmx:100801628 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03711 05 145095308 145097069 Aip05g03711 05 145095308 145097069 ECH
Aip05g03711 05 145095308 145097069 Aip09g02263 09 104937851 104939881 PCT