Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03709 ATGGCTTCCATTCCCACCCTTTCCTCTTCTTGTATACCTTCAATCTCTCCTAATAATGTTTCAAACCCCACCACCAACAACAATAATCTACACTTCACATCTCTCTTCGGAACCAGAATCACCATTCATCGCCTCTCTCCAATCCCTCCATTCCCCTCGGTGAGTTGCAGCACCCGTGCCACCACTGCAACGGTGTCCTTTAGTCTTCCCACCACGAAACCCAAGGCGGATACAATTGACAAAATCCCACAGTGGTCTGCGAGGTCTATAAAGTCTTTTGCTATGGCAGAATTGGAAGCCAGGAAGCTGAAGTATCCCAACACAGGAACCGAAGCGCTTCTCATGGGGATTTTGGTAGAAGGAACAAGTAAAGCTGCAAAATTCTTGAGAGCCAATGGAGTTTCTCTTTTCAAAGTACGGGAAGAAACAGTAGAGCTACTTGGGAAATCTGACCTGTATTTCTTTAGCCCTGAGCATCCTCCATTGACCGAACCAGCTCAGAAAGCCCTTGACTGGGCTGTGGATGAGAAATTGAAGTCAGGTGATGGAGGCGAAATAACCGTGACTCATTTACTTCTTGGAGTTTGGGCCCAAGAAGGATCAGCAGGTCGCCAGATCTTGTCCACTTTAGGTTTCAATGATGAAAAAGCCAAAGAACTTGCCAAAGAAATTAATGAAGATGTCGATTTGAGCTTTAAGAAGCAAGCTTGA 711 0.4571 MASIPTLSSSCIPSISPNNVSNPTTNNNNLHFTSLFGTRITIHRLSPIPPFPSVSCSTRATTATVSFSLPTTKPKADTIDKIPQWSARSIKSFAMAELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGVSLFKVREETVELLGKSDLYFFSPEHPPLTEPAQKALDWAVDEKLKSGDGGEITVTHLLLGVWAQEGSAGRQILSTLGFNDEKAKELAKEINEDVDLSFKKQA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03709 236 ProSiteProfiles Clp repeat (R) domain profile. 82 227 IPR004176 -
Aip05g03709 236 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 12 233 - -
Aip05g03709 236 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 12 233 IPR044217 -
Aip05g03709 236 Pfam Clp amino terminal domain, pathogenicity island component 96 148 IPR004176 -
Aip05g03709 236 Pfam Clp amino terminal domain, pathogenicity island component 185 222 IPR004176 -
Aip05g03709 236 SUPERFAMILY Double Clp-N motif 84 224 IPR036628 -
Aip05g03709 236 Gene3D - 84 233 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03709 Aip-Chr5 145061279 145063808 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03709 - - gmx:100786582 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03709 05 145061279 145063808 Aip05g03709 05 145061279 145063808 ECH