Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03688 ATGAGGCTACAACAAATGAATTTGGGAGTGCTGCTACTGTTCTTGCTTCTTGTTCTTGCTGGCTTTCCATATAAAGTAGAAGGGTATCTGTATCCATTAACAGATCGTCCTATAAACCCCTTGGTTGATCTATGGACAGATCGTTTCCTTGATCCACTTCGTGTTCTTGAGCAAATCCCAGTTGAGCTTGGAAAAAATGATCCATCATCACCCATGGCAATGATGATGACACCTGCAAAGGTAGATTGGAAGGAGACACCAGAAGGGCATGTTATAGCCCTTGATGTTCCAGGGTTGAACAGAGATGAGATCAAGATTGAAGTGGAGGAAGGGAACAGGGTTCTGAGGGTAAGTGGAGAGAGGAAGAAGGAGGAGGAGAAGGAAGGGGAACACTGGCACAGGGTTGAAAGATCCTATGGCAAATTCTGGAGGCAGTTCAAGGTGCCTGAGAATGTGGACTTGGAATCTGTGAAGGCTAAGCTAGAGAATGGTGTGCTTACTCTGACACTGGAAAAATTGTCACCTGATAAGATCAAAGGTCCAAGAATGGTGAGCATTGCAGGGGAGAGTGAGAAACCAGCACAAATCAAGGTCAATGAGACCAAACAGGAGCTGTGA 618 0.4547 MRLQQMNLGVLLLFLLLVLAGFPYKVEGYLYPLTDRPINPLVDLWTDRFLDPLRVLEQIPVELGKNDPSSPMAMMMTPAKVDWKETPEGHVIALDVPGLNRDEIKIEVEEGNRVLRVSGERKKEEEKEGEHWHRVERSYGKFWRQFKVPENVDLESVKAKLENGVLTLTLEKLSPDKIKGPRMVSIAGESEKPAQIKVNETKQEL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03688 205 Gene3D - 35 188 IPR008978 -
Aip05g03688 205 ProSiteProfiles CS domain profile. 76 184 IPR007052 -
Aip05g03688 205 Pfam Hsp20/alpha crystallin family 82 186 IPR002068 -
Aip05g03688 205 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 17 195 - -
Aip05g03688 205 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 17 195 - -
Aip05g03688 205 CDD ACD_ScHsp26_like 80 172 - -
Aip05g03688 205 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 70 189 IPR002068 -
Aip05g03688 205 SUPERFAMILY HSP20-like chaperones 70 179 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03688 Aip-Chr5 144883757 144884374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03688 K13993 - gmx:547971 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03688 05 144883757 144884374 Aip09g02228 09 102297628 102298588 PCT