Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03654 ATGGCTTTGATGAGTTTGAAGGACACTTTCTACATATCACATGGATCACCAACGTTGGCCATTGACGATTCGATTGAGATAAGGAAGGTTCTTAAATCGTGGAATCGGATTTTCCCGCAGAAACCTTCTGCCATTCTTGTTATCTCCGGTCATTGGGACACAGCAGTTCCCTCCGTCAATGTTGTTCAGAGAAACGAAACCATTTACGACTTTTATGGCTTCCCTAAACCCATGTACCAGCTTAAGTATCCAGCACCTGGGGCTCCAGAGTTGGCAAGGAGGGTGAAGGAACTACTTCAAAAATCCGGTTTTGGCCGTGTCGACGAAGACAAGAGGAGAGGGCTTGATCACGGTGCTTGGGTTCCACTCTTGTTGATGTACCCCGAAGCTGATATCCCGGTATGTCAATTGTCTGTTCAATCTGATAAGGATGGGACTCATCACTATAACATGGGAAAGGCATTGACACCTCTTAAAGATGAAGGTGTGCTTATAATTGGTTCTGGAAGTGCTGTTCACAATCTGAGAGAGCTTAGAGTTCATTCCGGCAACACTGCTGTTCCCTGGGCTCTGGAATTCGATAATTGGTTGAAAAGGGCTCTTCTTGAAGGAAGATATGAGGATGTAAACAATTGGGATAAGAAAGCGCCGCACGCGAAGAAGGCTCATCCATGGCCAGATCACTTTTATCCACTTCATGTTGCCATTGGTGCAGCTGGTGGAAATCCAAAGGCCAAAGTTATCCACAGCAATATCGAATTAGGATCTCTCTCCTATGCCTCTTTCCAGTTTACTGAAGTTTCCGACTCGTGTTCTGCTTAA 822 0.455 MALMSLKDTFYISHGSPTLAIDDSIEIRKVLKSWNRIFPQKPSAILVISGHWDTAVPSVNVVQRNETIYDFYGFPKPMYQLKYPAPGAPELARRVKELLQKSGFGRVDEDKRRGLDHGAWVPLLLMYPEADIPVCQLSVQSDKDGTHHYNMGKALTPLKDEGVLIIGSGSAVHNLRELRVHSGNTAVPWALEFDNWLKRALLEGRYEDVNNWDKKAPHAKKAHPWPDHFYPLHVAIGAAGGNPKAKVIHSNIELGSLSYASFQFTEVSDSCSA 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03654 273 Gene3D - 3 265 - -
Aip05g03654 273 PIRSF Doxgns_DODA 2 266 IPR014436 GO:0008270|GO:0016701
Aip05g03654 273 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 264 IPR004183 GO:0006725|GO:0008198|GO:0016491
Aip05g03654 273 PANTHER UNCHARACTERIZED 4 268 - -
Aip05g03654 273 PANTHER EXTRADIOL RING-CLEAVAGE DIOXYGENASE-LIKE 4 268 - -
Aip05g03654 273 SUPERFAMILY LigB-like 9 264 - -
Aip05g03654 273 CDD 45_DOPA_Dioxygenase 9 264 IPR014436 GO:0008270|GO:0016701
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03654 Aip-Chr5 144328042 144330353 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03654 K15777 - gmx:100798236 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03654 05 144328042 144330353 Aip05g03654 05 144328042 144330353 ECH