Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03162 ATGGAAGCTGCATTAACCAGTCTACTTGCTCTTTCACCCAACCATGTTTTCAATGCATCTAATCCCGGAGATAGAAATTATGGGTTCAGATATAGCCGAAGTCGGAGTGTTGTAATAATGAGTGCGGCAGGGGCAGTAATAGGGAAAGGTGGCGGGGTGTTGGACAGACCAACCATAGAGACAACTTCGCCTTCTCGTCAATCTGAGTTTGATTTGAGAAAATCGCGAAAAACATCCCCGCCTTACAGAGTTTTGCTGCACAATGACAACTACAACAAGCGTGAATACGTCGTGCAAGTTCTGATGAAGGTGATACCCGGAATGACATTAGACAATGCAGTTAACATCATGCAGGAAGCGCATTATAACGGCATGGCGGTGGTGATCGTGTGTGCTCAAGTGGATGCTGAAGACCACTGCATGCAGTTAAGAGGAAATGGGCTCCTAAGTTCAATTGAACCAGCAGATGGTGGTTGCTGA 480 0.4625 MEAALTSLLALSPNHVFNASNPGDRNYGFRYSRSRSVVIMSAAGAVIGKGGGVLDRPTIETTSPSRQSEFDLRKSRKTSPPYRVLLHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGMAVVIVCAQVDAEDHCMQLRGNGLLSSIEPADGGC 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03162 159 Gene3D - 58 156 IPR014719 -
Aip05g03162 159 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 145 IPR003769 GO:0030163
Aip05g03162 159 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 63 156 IPR022935 GO:0006508
Aip05g03162 159 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 159 IPR022935 GO:0006508
Aip05g03162 159 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 1 159 - -
Aip05g03162 159 SUPERFAMILY ClpS-like 76 153 IPR014719 -
Aip05g03162 159 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03162 Aip-Chr5 135550187 135552827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03162 K06891 - gmx:100785379 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03162 05 135550187 135552827 Aip05g03162 05 135550187 135552827 ECH