Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03161 ATGCTGACCTACAACCGTGACAGCGACGATGACTCAGAGGCCGAACCAGAAGATGGCGAAGACAAACGGAATAAGGAAGTACGAGAAAAGTGTGTGAGTGTGTTGGCTGTTGTGACCGGGTTGTACCTCTCTGCTTCACTCCACCAAGCCCAACAAGTCCTCTCCCTTAACCCTCAGCTTCTAGAAACTTCTCTTCAACAAGAACAAGAAGCACAAATCAACCCAACTTCCACTTCTTCGTCTTCATTCTCTGTTAATCTACACACTAGAGATTCACTCTTCAATGCCAAGCACAAAGACTACAAGTCCCTTGTCTTGGCCCGACTCGCCCGCGACTCAGCCCGGGTCGACGCGCTCAACCTCAAGCTTCACTTTGCCCTCAACAACATCTCCAAATCGGACCTTCACCCCACCCAAACAGAACTCCTACCCGAAGACCTATCCACTCCGGTGGCCTTCGGCACCAGCATGGGCTCCGGCGAGTACTTCACGCGTGTCGGCGTGGGCCAACCCTCAAAGCCTTTCTACATGGCACTCGACACTGGAAGCGACGTTAACTGGCTTCAGTGCAAGCCCTGTTCTGACTGCTACCAACAATCCGACCCGGTTTTCGACCCGACATTATCATCTTACAGCCCACTAACTTGCCAGGCCCAGCAGTGTCAGGCCTTGGACGTATCGGCTTGTCGCAACGGCAGGTGCTTATACCAAGTGAGTGGGTTTGAATAA 729 0.5254 MLTYNRDSDDDSEAEPEDGEDKRNKEVREKCVSVLAVVTGLYLSASLHQAQQVLSLNPQLLETSLQQEQEAQINPTSTSSSSFSVNLHTRDSLFNAKHKDYKSLVLARLARDSARVDALNLKLHFALNNISKSDLHPTQTELLPEDLSTPVAFGTSMGSGEYFTRVGVGQPSKPFYMALDTGSDVNWLQCKPCSDCYQQSDPVFDPTLSSYSPLTCQAQQCQALDVSACRNGRCLYQVSGFE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03161 242 Pfam Xylanase inhibitor N-terminal 162 239 IPR032861 -
Aip05g03161 242 SUPERFAMILY Acid proteases 156 238 IPR021109 -
Aip05g03161 242 MobiDBLite consensus disorder prediction 1 25 - -
Aip05g03161 242 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 177 188 IPR001969 GO:0004190|GO:0006508
Aip05g03161 242 Gene3D Acid Proteases 137 241 IPR021109 -
Aip05g03161 242 ProSiteProfiles Peptidase family A1 domain profile. 162 242 IPR033121 -
Aip05g03161 242 PANTHER ASPARTYL PROTEASES 38 239 IPR001461 GO:0004190|GO:0006508
Aip05g03161 242 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 38 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03161 Aip-Chr5 135548589 135549917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03161 139 226 Miscellaneous Gene Families AT1G77480 32.609 5.82e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03161 K22683 - ahf:112749193 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03161 05 135548589 135549917 Aip05g03161 05 135548589 135549917 ECH