Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03102 ATGGCGTTCGCAGCCACCACGACGGCAACTACTAACCTCTCTGAATTGCACCTCAAAACTTGTTCACCTTCATCACTCTCACTCACTTCTCCTCATTCTTCATCTTCCTCCTCAACGCTCTTCTTCTTTGGCTCTAAACCCCCATTCCGCACTCTTACACTCACACCCTTCTCTTCTCTTAGAACCTCACAACAACAACATACAAAACAGAATAACCGTTCTTCTTCCACAACAAAACCTAACACCAACACCAGCACCAGCACCAGCAACCCTTCTGCCCCATGGCTCGCAAAAACCCCTCCCCCCAATAATTCCTCCAAAAGGGTCACCGAATCTCACACCAACGACCCACTTCATGATACAACGGAAAATCGTTACTTTGACGGTGATAAGGGGCAAAACGCGGTTGAGAGGATCGTTCTTCGGTTGAGGAACCTGGGATTGGCTTCAGATGATGATGATGATGATGATGATGAAGAAGGAAAAGAAGAGGTCTCAATTGGTGGTGCTGGTGATGATTTTCCGGTGACCGGAGAAGAGAGGCTTGGTGAGCTTCTGAGAAGGGAATGGGTTAGGCCTGATGCTATTGTACGTGAAGATGATGGTGTTGGTGATGATGAGATGGTTTTTTTGCCATGGCAGAGAGAAGTGGAAGAGACAGATATGGGTGCTGCTAAAGAGGGAGGGGAGAAAGGGATGAGGGATAAGAGGAGAGTAAAGGCTCCAACTTTGGCGGAGCTGACGCTTGAGGACGAGGTTTTGAGGAGGTTAAGGAGGGAAGGAATGCGTACTAGGGAGAGGGTTAATGTCCCTAAAGCTGGGCTCACCAAGGAGGTTATGGAGAAGATTCATGAGAGGTGGAGGAAGGAGGAGCTTGTGAGGCTCAAGTTTCATGAGGACCTTGCAAGGGACATGAGGACTGCTCATGAGATTGTTGAGCGCCGAACAGGAGGGTTGGTCACATGGAGGGCAGGTAGTGTTATGATGGTTTATCGTGGTGCTAATTACCAGGGGCCTTCATCTGGGGGTCAACACAATGCAAAAGAAGGTGATGCTTTTTTTGTACCGGATGTCTCTTCGAGAACAAAAGACAGTGATGCAGCCTCATCATCGGAGAAGAGTGAGCCAATTGTGTGGAATCGAGTACAGCCTGAAAACATGACAGAGGAGGAAGCGGAGTACAATGCCCTGCTTGATAGTTTAGGTCCTCGTTTCATTGAATGGTGGGGTACAGGAATACTTCCTGTTGATGCTGATTCACTTCCCCCTACAGTTCCAGGTTACAAAACACCCTTTAGGCTTCTTCCTACTGGAATGCGTTCTCGACTAACAAATGCGGAAATGACCAATTTAAGGAAACTTGCCAAGACACTTCCTTGTCATTTTGCCTTGGGGAGAAATAGACGTCACCAAGGCCTAGCTTGTGCTATTCTTAAGCTTTGGGAGAAAAGTTTAATTGCAAAGATTGCTGTAAAACGTGGTATCCAGAACACAAACAATGAACTGATGGCTGAGGAGATAAAGACATTGACCGGAGGTACCTTGCTGCTAAGGAATAAATATTACATTGTTATATATCGTGGGAAGGACTTTGTCCCGACAGCTGTAGCTACGGTCCTAGCTGAAAGACAGGAAATGACCAAACAGGTACAAGATGTTGAAGACAAGTTCCGGTCTGGTGTTCTTGATGCTACTCCATCAGGGAAGGATGAATCAGCAACACCACGAGCAGGATCTTTAGCAGAGTTCTATGAAGCTCAGGCACGCTGGGGAAGGGATATATCTACTGAAGAACGGGAGAGGATGATGGAGGAAGCTGCCAAATCCAAGCAAGTCAGGCTAGTCAGACATATCGAACATAAATTAGCTACCGCTGAGGCCAAAAAACTTAGGGCAGAAAGGCTGTTAGCAAAAATAGAAGCATCTATGGTTCCAGCTGGTCCTGATTATGACCAGGAGACAATCACAGATGAAGAACGTGTTGTGTTCCGTCGGATTGGTTTAAGAATGAAGGCATATTTACCACTTGGTATTCGTGGTGTTTTTGATGGTGTCGTTGAGAACATGCATTTGCATTGGAAACATCGAGAGCTTGTAAAATTGATATCAAAACAGGAGACCCTTGCTTTTGTTGAAGATACAGCAAGGTTACTGGAATTTGAAAGTGGTGGAATCCTAGTGGCAATAGAGAGAGTTCCCAAAGGATTTGCTCTTATTTACTATCGTGGAAAGAATTATAAGAGGCCCATCATTCTGAGGCCTAAAAACTTACTGACAAAGCAAAAAGCATTGAAGCGATCGGTGGCTATGCAACGGCATGAGGCTCTTAGTCAGCATATTACTGAGTTGGAGAAAACCATAGAACAAATGAAAACAGAACTTGGAATGCCTCAAGATCTGGAAGATGAAGATATGCCAAACATAGAGGACCATAACCAAATAGACAATAGCTCGGAATTCAGCCAAAGCGAAGATGAAAATTTTGATGGTTTGGATGATTATGATGACGATGAAGATGATGATTCTGATGAGGAGCAAGACATTGATTGGGAAGATGAGGATGACTCTGAGTTTTCTAAATTAGAAAATGGTGAACATCCTTGA 2604 0.4512 MAFAATTTATTNLSELHLKTCSPSSLSLTSPHSSSSSSTLFFFGSKPPFRTLTLTPFSSLRTSQQQHTKQNNRSSSTTKPNTNTSTSTSNPSAPWLAKTPPPNNSSKRVTESHTNDPLHDTTENRYFDGDKGQNAVERIVLRLRNLGLASDDDDDDDDEEGKEEVSIGGAGDDFPVTGEERLGELLRREWVRPDAIVREDDGVGDDEMVFLPWQREVEETDMGAAKEGGEKGMRDKRRVKAPTLAELTLEDEVLRRLRREGMRTRERVNVPKAGLTKEVMEKIHERWRKEELVRLKFHEDLARDMRTAHEIVERRTGGLVTWRAGSVMMVYRGANYQGPSSGGQHNAKEGDAFFVPDVSSRTKDSDAASSSEKSEPIVWNRVQPENMTEEEAEYNALLDSLGPRFIEWWGTGILPVDADSLPPTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKTLPCHFALGRNRRHQGLACAILKLWEKSLIAKIAVKRGIQNTNNELMAEEIKTLTGGTLLLRNKYYIVIYRGKDFVPTAVATVLAERQEMTKQVQDVEDKFRSGVLDATPSGKDESATPRAGSLAEFYEAQARWGRDISTEERERMMEEAAKSKQVRLVRHIEHKLATAEAKKLRAERLLAKIEASMVPAGPDYDQETITDEERVVFRRIGLRMKAYLPLGIRGVFDGVVENMHLHWKHRELVKLISKQETLAFVEDTARLLEFESGGILVAIERVPKGFALIYYRGKNYKRPIILRPKNLLTKQKALKRSVAMQRHEALSQHITELEKTIEQMKTELGMPQDLEDEDMPNIEDHNQIDNSSEFSQSEDENFDGLDDYDDDEDDDSDEEQDIDWEDEDDSEFSKLENGEHP 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03102 867 Coils Coil 773 793 - -
Aip05g03102 867 Coils Coil 615 642 - -
Aip05g03102 867 Coils Coil 536 556 - -
Aip05g03102 867 MobiDBLite consensus disorder prediction 357 383 - -
Aip05g03102 867 MobiDBLite consensus disorder prediction 112 131 - -
Aip05g03102 867 MobiDBLite consensus disorder prediction 60 131 - -
Aip05g03102 867 MobiDBLite consensus disorder prediction 148 177 - -
Aip05g03102 867 MobiDBLite consensus disorder prediction 60 111 - -
Aip05g03102 867 Pfam CRS1 / YhbY (CRM) domain 656 731 IPR001890 GO:0003723
Aip05g03102 867 Pfam CRS1 / YhbY (CRM) domain 443 527 IPR001890 GO:0003723
Aip05g03102 867 Pfam CRS1 / YhbY (CRM) domain 250 332 IPR001890 GO:0003723
Aip05g03102 867 SMART CRS1_YhbY_2 443 527 IPR001890 GO:0003723
Aip05g03102 867 SMART CRS1_YhbY_2 249 332 IPR001890 GO:0003723
Aip05g03102 867 SMART CRS1_YhbY_2 655 742 IPR001890 GO:0003723
Aip05g03102 867 ProSiteProfiles CRM domain profile. 441 538 IPR001890 GO:0003723
Aip05g03102 867 ProSiteProfiles CRM domain profile. 653 753 IPR001890 GO:0003723
Aip05g03102 867 SUPERFAMILY YhbY-like 654 752 IPR035920 -
Aip05g03102 867 MobiDBLite consensus disorder prediction 799 867 - -
Aip05g03102 867 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 9 863 IPR045278 GO:0000375|GO:0003729
Aip05g03102 867 MobiDBLite consensus disorder prediction 825 858 - -
Aip05g03102 867 Gene3D - 442 535 IPR035920 -
Aip05g03102 867 Gene3D - 247 346 IPR035920 -
Aip05g03102 867 Gene3D - 654 756 IPR035920 -
Aip05g03102 867 SUPERFAMILY YhbY-like 443 534 IPR035920 -
Aip05g03102 867 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 9 863 - -
Aip05g03102 867 ProSiteProfiles CRM domain profile. 247 343 IPR001890 GO:0003723
Aip05g03102 867 SUPERFAMILY YhbY-like 248 339 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03102 Aip-Chr5 134376496 134382789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03102 - - ahf:112802226 1511.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03102 05 134376496 134382789 Aip05g03102 05 134376496 134382789 ECH
Aip03g02362 03 37643681 37644657 Aip05g03102 05 134376496 134382789 PCT