Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03048 ATGAAGGCATCGCACATTGCCTTGTGCACCATGATGGTGTTGCTTCTTGCTGAAGTTCAAGTTTCAATGGCAGTAACATGCAGCCCTGTACAACTGAGTCCTTGTGTGAGTGCAATCACCACTTCAAACCCTCCATCAAGTCTATGCTGCTCTAAGATCAGGGAACAGAAGCCATGCCTCTGCCAATATGTTAGGAACCCTAATCTCAAGAAGTTTGTTGACTCTCCTAATGCAAGGAGAGTTGCCAGCACTTGTGGAACTCCATTCCCAAGGTGCTGA 279 0.4695 MKASHIALCTMMVLLLAEVQVSMAVTCSPVQLSPCVSAITTSNPPSSLCCSKIREQKPCLCQYVRNPNLKKFVDSPNARRVASTCGTPFPRC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03048 92 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 92 IPR036312 -
Aip05g03048 92 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 1 92 - -
Aip05g03048 92 Pfam Probable lipid transfer 20 87 IPR016140 -
Aip05g03048 92 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 1 92 IPR033872 GO:0006869
Aip05g03048 92 CDD nsLTP2 27 92 IPR033872 GO:0006869
Aip05g03048 92 Gene3D - 25 92 IPR036312 -
Aip05g03048 92 SMART aai_6 27 92 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03048 Aip-Chr5 133298031 133298823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g03048 4 92 Acyl Lipid Metabolism Gene Families AT3G18280 56.180 2.92e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03048 - - jre:109010671 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03048 05 133298031 133298823 Aip05g03048 05 133298031 133298823 ECH