Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03039 ATGGCTCACAATCCATCTGATTCTGATAATGAAATTACAACAACAAAGCGAAAGCTCTTTGAACATGATATACATCAAGTTCTTGGAGGAAGAGAAGTGGCAGATGTTTTGTTATGGAGGAACAAGAAAATATCAGCTGCAATTTTGATTGGAATGACAGTGATATGGTTTCTATTTGAGGTTGTTGAGTACAATTTGGTGCCTCTGCTTTGTCACATTTCCATCACAATTATGCTTGTTCTGTTCATATGGTCAACTATGGCACAAATTTTCAAATGGAATGCACCCAATATCCCAGATATTATTTTACAGGATTACTTGTTTGAGGATCTTGCTACAATCTTCCACAGAGGATTCAAACAGTTATTACCAATGCTTCATTATATTTCAAGTGGAATTGACCTTCCAAGATTTCTCCTGATCATTGTTAGTCTCTACATGTTGTCAGTGATTGGAACCTACCTCAGCTTTGTAAATCTGTTATACATTGGTTTTCTCTGCATGCTGACACTGCCAATTATGTATGAACGTTATGAGGAAGAAATCAACAACCTAGTTGGCAATGTCATAGTGGACCTTAGGAAAAAGTACAAACAGTTTGAGAAGAGATATCTCAGCAAAATTCCAAGAGGATCAGTAAAAGAAAAGAAAAGGATATAA 660 0.3591 MAHNPSDSDNEITTTKRKLFEHDIHQVLGGREVADVLLWRNKKISAAILIGMTVIWFLFEVVEYNLVPLLCHISITIMLVLFIWSTMAQIFKWNAPNIPDIILQDYLFEDLATIFHRGFKQLLPMLHYISSGIDLPRFLLIIVSLYMLSVIGTYLSFVNLLYIGFLCMLTLPIMYERYEEEINNLVGNVIVDLRKKYKQFEKRYLSKIPRGSVKEKKRI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03039 219 PANTHER RETICULON 6 216 IPR045064 GO:0009617
Aip05g03039 219 PANTHER RETICULON-LIKE PROTEIN B9 6 216 - -
Aip05g03039 219 Pfam Reticulon 33 188 IPR003388 -
Aip05g03039 219 ProSiteProfiles Reticulon domain profile. 33 218 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03039 Aip-Chr5 133149080 133150948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03039 - - gmx:100809028 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03039 05 133149080 133150948 Aip05g03039 05 133149080 133150948 ECH