Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02994 ATGGAGAGAGAAGAACACCAAAAGGCGTCTCTCCATTCTCCTTTGGTTCAAGATTGGGGAGAGCAGGACAAAACAAAATCAATAGAAAAGAGTGAGGTACTTGAAGAAGTGAAGAAGCAGCTATGGCTATCAGGGCCTTTGGTATCTGTGAGCTTGCTCAATTATTGCCTGCAAGTCATATCTGTCATGTTTGTTGGTCATCTCGGCGAGTTGCCGCTTTCCGGCGCTTCAATGGCCACTTCTTTTGCCTCTGTCACAGGTTTTAGCTTATTGGTGGGAATGGCTAGTGCCTTGGACACCTTATGTGGGCAATCATATGGAGCAAAACAGCACAGAATGTTAGGCATACACATGCAGAGAGCAATGCTGATTCTCATGATTGTCAGCGTTCCGCTCGCGGTTATTTGGATCAACACAAGATCAATTCTGATGTTTCTTGGCCAAGATCCTGAGATTTCTACAGAAGCAGGAAGCTATGCTCAGTTAATGGTTCCAAGCCTGTTTGCTTATGGCCTTCTTCAGTGCCTAAACAGATTCTTGCAAACACAGAACATAGTGTTTCCAATGGTGTTCTGCTCTGGAATCACTACTTTGCTACATGTCCTTATTTGTTGGATTATGGTGTTCAAATCTGGATTGGGGAGTAGAGGAGCTGCCATAGCAAATTCTATATCTTATTGGATCAATGTTTTATTGCTCTCACTTTATGTCAAGCTTTCTCCTTCTTGTGCAAGGACTTGGTCAGGGTTTTCTAAAGAGGCATTTCAAAATATTCCCTCATTTCTTAGGCTTGCAATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAAATGATGGTTCTCCTTTCCGGTCTTCTTCCAAATCCACAATTGGAGACATCAGTTCTTTCTATTTGCTTGAATACAGCAGCAGCAGTTTGGATGATACCCTTTGGACTCAGTGGAGCTGTAAGCACTCGCGTCTCGAATGAACTTGGAGCTGGTAATCCCAGGACTGCACGCTTAGCAGTGTGTGTTGTGTTAGTAATGGCCATCATTGAGGGACTCATAGTTGGATTAGTACTAATATTAATTCGCCACGTTTGGGGCTATGCGTATAGTAACGAAGGCGAAGTGGTCGATTATGTTGCAGTTATGCTGCCAATTCTTGCAACATCCAACTTTCTTGATGGGCTCCAATGTGTTCTTTCAGGCACTGCTAGAGGATGTGGTTGGCAGAAAATTGGCGCATATGTGAATCTGGGATCATACTACTTAGTTGGGATTCCATCAGCTATTCTCTTGGCTTTTACGTTTCATATTGGCGGCAAGGGGTTATGGCTAGGGATCATATGTGCACTAATTGTTCAAGTACTTTCTCTACTGACCATTACTATAAGAACTGATTGGGACCAAGAGGCAAAGAAGGCTACAGATAGAGTCTTTGATTCAATCACACCAGACAGTATAGTCTCATGA 1467 0.4315 MEREEHQKASLHSPLVQDWGEQDKTKSIEKSEVLEEVKKQLWLSGPLVSVSLLNYCLQVISVMFVGHLGELPLSGASMATSFASVTGFSLLVGMASALDTLCGQSYGAKQHRMLGIHMQRAMLILMIVSVPLAVIWINTRSILMFLGQDPEISTEAGSYAQLMVPSLFAYGLLQCLNRFLQTQNIVFPMVFCSGITTLLHVLICWIMVFKSGLGSRGAAIANSISYWINVLLLSLYVKLSPSCARTWSGFSKEAFQNIPSFLRLAIPSAVMVCLEMWSFEMMVLLSGLLPNPQLETSVLSICLNTAAAVWMIPFGLSGAVSTRVSNELGAGNPRTARLAVCVVLVMAIIEGLIVGLVLILIRHVWGYAYSNEGEVVDYVAVMLPILATSNFLDGLQCVLSGTARGCGWQKIGAYVNLGSYYLVGIPSAILLAFTFHIGGKGLWLGIICALIVQVLSLLTITIRTDWDQEAKKATDRVFDSITPDSIVS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02994 488 PANTHER PROTEIN DETOXIFICATION 21 476 - -
Aip05g02994 488 CDD MATE_eukaryotic 36 472 IPR045069 GO:0042910|GO:1990961
Aip05g02994 488 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g02994 488 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g02994 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 476 - -
Aip05g02994 488 TIGRFAM matE: MATE efflux family protein 46 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02994 Aip-Chr5 132226397 132230934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02994 K03327 - gmx:100815319 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02994 05 132226397 132230934 Aip05g02994 05 132226397 132230934 ECH