Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02981 ATGGTGGCTCCAAAACCATCTCCACCACTGTTGCTTACAACTTTGGTGGTTGTAATAGTTGGCTCAACAATAATCCAGTGTGGCGCGGGTGCAGGGGATCTTGATGGGGTGCATTTTGACACGGGGGGTTTGAGCAGACAAGTGTTCCCAAAGGGCTTTGTGTTTGGAACAGCAACTTCTGCTTACCAAGTTGAAGGTATGGCCGACAAAGATGGTCGTGGCCCCAGCATTTGGGATGTTTTTATCACTAAACCAGGGATTGTCGCCGGTAACGGAACTGCAGAAGTTTCGGTGGATCAGTACCATCGCTACAAAGTAACCTACCGATTCTCAATCTCGTGGTCAAGAATCTTTCCAAATGGAACAGGCGAAGTAAATTGGAAAGGGGTAGATTATTACAATAGGTTGATCAATTCCTTACTTGAAAAAGGCATTACTCCATATGCAAATCTCTACCATTATGACCTTCCTCAAGCTCTTGAATTGAGATATAATGGATTATTGAGCCACCAAGTAGTGAATGATTTTGCAGATTATGCAGAATTCTGTTTCAAGACATTTGGGGACAGAGTGAAGAACTGGATGACATTCAATGAACCAAGAGTGGTAGCTGCTCTTGGCTATGACAATGGCTTCTTTGCCCCTGGAAGGTGCTCAAAGGAATATGGGAATTGCACTGTTGGAAACTCAGGCACTGAGCCTTACATTGTTGCACACAATTTGATTTTGGCACATGCAACTGCTGTTCAAAGATACAGAACCAAATACCAAGAAACTCAAAAGGGTAGGATTGGAATTCTCTTGGACTTTGTGTGGTATGAGCCTCTTACAAGATCCAAGGCTGACAACTATGCTGCTCAAAGAGCAAGAGACTTTCATGTTGGATGGTTCATTCATCCCATTGTATATGGAGAGTATCCAAAAACCATGCAAAACATTGTTGGGAACAGACTCCCAAAGTTCAGTGTGGAAGAAGTTAAGATTGTGAAGGGTTCCATGGATTTTGTTGGCATTAACCAGTATACTACTTACTACATGGCTGAACCCCACCTATCAAAACCACCAAAAGTTCCAGGCTACCAACAAGATTGGAATGTAGCATTTGTTTATGCTAAAAATGGGAAACCTATTGGTCCGAAGGCATATTCATATTGGCTTTACAATGTACCATGGGGATTGTACAAGGCACTAATATACATCAAGGAGCGTTATGGAAACCCAACTGTCATCTTATCTGAAAATGGAATGGATGATCCGGGAAGTTGGACTCTACCAAAGGGCTTACATGACACCACAAGAATAAATTTTTACAAAGATTATCTAACTCAATTAAAGAAAGCAGTGGATGATGGAGCGAATGTAGTTGGATATTTTGCATGGTCATTGCTTGATAACTTTGAATGGAGATTAGGGTACACATCAAGGTTTGGAATTGTGTATGTTGATTTCAAGACCCTTAAGAGATACCCTAAGATGTCAGCATATTGGTTCAAGCAACTCCTTACTAGGAAGACTAAGAACTAA 1524 0.4154 MVAPKPSPPLLLTTLVVVIVGSTIIQCGAGAGDLDGVHFDTGGLSRQVFPKGFVFGTATSAYQVEGMADKDGRGPSIWDVFITKPGIVAGNGTAEVSVDQYHRYKVTYRFSISWSRIFPNGTGEVNWKGVDYYNRLINSLLEKGITPYANLYHYDLPQALELRYNGLLSHQVVNDFADYAEFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKEYGNCTVGNSGTEPYIVAHNLILAHATAVQRYRTKYQETQKGRIGILLDFVWYEPLTRSKADNYAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFSVEEVKIVKGSMDFVGINQYTTYYMAEPHLSKPPKVPGYQQDWNVAFVYAKNGKPIGPKAYSYWLYNVPWGLYKALIYIKERYGNPTVILSENGMDDPGSWTLPKGLHDTTRINFYKDYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFKTLKRYPKMSAYWFKQLLTRKTKN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02981 507 PRINTS Glycosyl hydrolase family 1 signature 475 487 IPR001360 GO:0004553|GO:0005975
Aip05g02981 507 PRINTS Glycosyl hydrolase family 1 signature 430 441 IPR001360 GO:0004553|GO:0005975
Aip05g02981 507 PRINTS Glycosyl hydrolase family 1 signature 451 468 IPR001360 GO:0004553|GO:0005975
Aip05g02981 507 PRINTS Glycosyl hydrolase family 1 signature 332 346 IPR001360 GO:0004553|GO:0005975
Aip05g02981 507 PRINTS Glycosyl hydrolase family 1 signature 409 417 IPR001360 GO:0004553|GO:0005975
Aip05g02981 507 Gene3D Glycosidases 34 506 - -
Aip05g02981 507 SUPERFAMILY (Trans)glycosidases 43 502 IPR017853 -
Aip05g02981 507 PANTHER GLYCOSYL HYDROLASE 33 503 IPR001360 GO:0004553|GO:0005975
Aip05g02981 507 PANTHER BETA-GLUCOSIDASE 44 33 503 - -
Aip05g02981 507 Pfam Glycosyl hydrolase family 1 46 504 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02981 Aip-Chr5 132024229 132029414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02981 41 506 Glycoside Hydrolase AT3G18080 79.036 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02981 K05350 - gmx:100814740 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02981 05 132024229 132029414 Aip05g02981 05 132024229 132029414 ECH