Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02965 ATGAGAAGGATTACCTCCTCCGTACTCCTCCGGACCTTATCCGCCGCTCGAGGCGAAGCCGTCTCCTTCTCCGTCCCCAACCGTTTCCTCCAGGTAGCTCTCTATGGCAGCAGTGCCGGCGGCGCCAGAGCTCACCGCCGCTGGTGGTTCACCTACGGACCTTTCGCCGGGGCATCGCTCGGCGTCGCCGGGGCTCTGGCGACGGCGGTGGCCACCACCTCGGCTTATCAGGAAGTCTTTGCCAAGGAGCCGCCGCCGCCTGAGGCTCTCCCGAACGACGTCGTTCTCTACCAATACGAGGCTTGCCCTTTCTGCAATAAAGTCAAAGCATATTTGGATTACTATGATATACCTTACAAAGTTGTGGAGGTCAACCCGCTCAGTAAGAAAGAAATTAAATGGTCTGAGTATAAGAAGGTGCCAATATTGATGGTAGATGGTGAGCAGCTAAATGACTCTTCAGCTATAATTGACATGCTGGGAGAGAAGATTATGTCAAAGAAAAAGGCAGGTGAGGATGACGAAGAGACAAAATGGAGGCGGTGGGTTGATAATCATTTAGTACATGTTCTGTCACCAAACATATACCGAAATACTTCTGAAGCACTCGAGTCCTTTGACTACATCACGAGCAATGGAAATTTCAGCTTTACAGAGAAAATTACTGTTAAGTATGCTGGAGCTGCAGCTATGTATTTTGTGTCCAAGAATCTGAAGAAGAAATATAACATCACTGATGAACGTGCTGCTCTTTACGAGGCAGCAGAAACATGGGTAGATGCTCTGAATGGCCGGGAATTTCTCGGAGGGTCTAAGCCTAACTTAGCTGACCTGGCAGTGTTCGGGGTTTTAAGACCCATTCGGTATCTGAGGTCGGGAAAGGATATGGTGGAACACACGCGGATTGGTGACTGGTACTCGAGAATGGAGAGTGTTGTGGGAGAGTCTGCCAGGCTCTATCCCATTCTTCTTCTTCTTCTCTTGGTTCTCACCATTGGTGGCGCTTCATATCTCTCTCCCTCTCTCTCTCTCGGTGATTGTGGAAGAAGAAGCTACATAGCAGTATGGGGACCCCACAACCCGCGAATCACGTATGGGTCATACTTGGTCTTGGTTTTGCTGGAATCTTTCTCATTACTGCNNNNNCCTCCCAAAGCACCTCTCCCTCTCTCTCCACTCACCTTCGCCCTCTCTGACCTATTTGACATAGATGGACATGTTACTACATTTGGGCATCCAGAGTGGGCGAGGACACACGAAGCTGCCTCTCAGACATGTCCTGTGGTATCTGCGCTGGTCGAAGGTGGTGCAACCTGCATTGGGACTACTGTTGTTGATGAACTAGCTTTAGGTCTTAGTGGTGAAAATAAACATTATGGAACGCCAACCAATCCTGCTTTGCCTGCTCGAGTACCAGGCGGCTCCTCCAGCGGTGCTGCTGTTGCTGTGGCTGCCAATTTGGTTGATTTTGCCCTTGGTGTTGATACCGTTGGAGGGGTAAGAGTGCCTGCTGGATTTTGTGGCATTTTAGGATTTCGACCTTCATATGGGGCAGTCTCTCATGTTGGAAGCATACCTGTTTCAAAAAGCCTGGACACTATTGGCTGGTTTGCAAGGGATCCTAATATTTTGCGACTTGTTGGGCATATACTTATGCAAGTACCATATATATTTCAACGCAATCCACGACAAATAATTATAGCTGATGATTGTTTTCAGCAACTAAATGTCCCTCTCGACAGAAGTTCTCAGTTGGTCATCAAATCTGCTGAGAAGCTTTTTGGAAGGCAAGTATTGAAGCATATAAATCTTGAGGACTATTTAAGTTCTAATGTTCCTACTTTGAAAGAGCTCTCCAGTCTCAAAACAAATGGTGAACTTAAAGTTTCGTCATTGAAATCACTTGCAAATGTTATGCAGTTTCTACAAAGACATGAATTTAGACTTGTGCATGAGGAGTGGATAAACACAGTAAAGCCTGATCTTCATCCAGCTGTTTCAGCAGATTTATATGAAAAGTTTGAGGTATCTGATGTAGAGGTTGAACACTTCAAATCCATTAGAAATGAAATGCGTGCTGCTGTCAGATCTCTTTTGAAGAATGAAGGAATATTGGTTATTCCTACTGGAGCTGATCCTCCTCCAAAGTTGGGTGGCAAAGAGATCTCATCAAAGGACTATTGGAGTCATGCATTTAGTTTGCTAAGTATTGCTAGCATATCAGGATGCTGTCAGGTCACAATACCATTAGGAATTTACGAAAAGTGTCCTGTTTCGGTGTCCTTAATAGCTCGGCATGGTAATGATTGCTTTCTACTGGACACACTACAGACCATGTATTCTACGCTCCAAGAGCAGGTTGATATTGCTGCCAAAAGTAAATCACCAAGAAATGTTGTCACTAAGGAAGAAGCTGCTGAAATTGCGAAAGAAAGGGGAAATCAAGCTTACAAAGACAAGCAGTGGCAGAAAGCCATTGGATTTTATTCGGAAGCCATAAAACTGAGCAGCGACAATGCAACATACTACAGTAATAGGGCCCAAGCATCTCTAGAACTTGGAAGTTACCTCCAAGCTGAGTCGGATTGTACAAAAGCAATTAGCCTTGACAAAAAGAATGTCAAAGCGTATTTTCGAAGAGGTAGAGCAAGAGAGATGCTTGGCTACTATACTGATGCAATCGATGGTAGGATCTTTCACTCAGTTCAGACTTGCGTGCGACAAGTATCTGCATGCTACTATATTTCCTTGTGTACATCTTTGTTTCATTGTTGCTCCATTTTCATATGA 2790 0.453 MRRITSSVLLRTLSAARGEAVSFSVPNRFLQVALYGSSAGGARAHRRWWFTYGPFAGASLGVAGALATAVATTSAYQEVFAKEPPPPEALPNDVVLYQYEACPFCNKVKAYLDYYDIPYKVVEVNPLSKKEIKWSEYKKVPILMVDGEQLNDSSAIIDMLGEKIMSKKKAGEDDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFDYITSNGNFSFTEKITVKYAGAAAMYFVSKNLKKKYNITDERAALYEAAETWVDALNGREFLGGSKPNLADLAVFGVLRPIRYLRSGKDMVEHTRIGDWYSRMESVVGESARLYPILLLLLLVLTIGGASYLSPSLSLGDCGRRSYIAVWGPHNPRITYGSYLVLVLLESFSLLXXPPKAPLPLSPLTFALSDLFDIDGHVTTFGHPEWARTHEAASQTCPVVSALVEGGATCIGTTVVDELALGLSGENKHYGTPTNPALPARVPGGSSSGAAVAVAANLVDFALGVDTVGGVRVPAGFCGILGFRPSYGAVSHVGSIPVSKSLDTIGWFARDPNILRLVGHILMQVPYIFQRNPRQIIIADDCFQQLNVPLDRSSQLVIKSAEKLFGRQVLKHINLEDYLSSNVPTLKELSSLKTNGELKVSSLKSLANVMQFLQRHEFRLVHEEWINTVKPDLHPAVSADLYEKFEVSDVEVEHFKSIRNEMRAAVRSLLKNEGILVIPTGADPPPKLGGKEISSKDYWSHAFSLLSIASISGCCQVTIPLGIYEKCPVSVSLIARHGNDCFLLDTLQTMYSTLQEQVDIAAKSKSPRNVVTKEEAAEIAKERGNQAYKDKQWQKAIGFYSEAIKLSSDNATYYSNRAQASLELGSYLQAESDCTKAISLDKKNVKAYFRRGRAREMLGYYTDAIDGRIFHSVQTCVRQVSACYYISLCTSLFHCCSIFI 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02965 929 Gene3D - 169 319 - -
Aip05g02965 929 CDD GST_N_mPGES2 93 164 - -
Aip05g02965 929 SFLD Prostaglandin E synthase like.1 58 318 IPR034334 GO:0050220
Aip05g02965 929 CDD GST_C_mPGES2 172 315 IPR034335 -
Aip05g02965 929 Pfam Amidase 388 547 IPR023631 -
Aip05g02965 929 PANTHER OUTER ENVELOPE PROTEIN 64, CHLOROPLASTIC 382 895 - -
Aip05g02965 929 SUPERFAMILY TPR-like 805 895 IPR011990 GO:0005515
Aip05g02965 929 ProSitePatterns Glutaredoxin active site. 96 112 IPR011767 -
Aip05g02965 929 Gene3D Glutaredoxin 89 167 - -
Aip05g02965 929 ProSiteProfiles Glutaredoxin domain profile. 82 179 - -
Aip05g02965 929 Gene3D Tetratricopeptide repeat domain 804 906 IPR011990 GO:0005515
Aip05g02965 929 Pfam Glutathione S-transferase, N-terminal domain 96 162 IPR004045 -
Aip05g02965 929 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 92 168 IPR004045 -
Aip05g02965 929 SUPERFAMILY GST C-terminal domain-like 170 313 IPR036282 -
Aip05g02965 929 ProSiteProfiles TPR repeat profile. 806 839 IPR019734 GO:0005515
Aip05g02965 929 SMART tpr_5 806 839 IPR019734 GO:0005515
Aip05g02965 929 SMART tpr_5 840 873 IPR019734 GO:0005515
Aip05g02965 929 SFLD Glutathione Transferase (cytosolic) 58 318 IPR040079 -
Aip05g02965 929 Gene3D Amidase signature (AS) domain 380 782 IPR036928 -
Aip05g02965 929 SUPERFAMILY Amidase signature (AS) enzymes 388 775 IPR036928 -
Aip05g02965 929 PANTHER AMIDASE 1 382 895 - -
Aip05g02965 929 SUPERFAMILY Thioredoxin-like 93 187 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02965 Aip-Chr5 131558667 131573982 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02965 390 779 Acyl Lipid Metabolism Gene Families AT1G08980 50.761 3.01e-136 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02965 - - gmx:100786059 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02965 05 131558667 131573982 Aip05g02965 05 131558667 131573982 ECH