Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02936 ATGTCTATCGACCTCAAACTCTCGCGCTTCAATCGTATTTATCGCCCTTCGGAAGCACTGGAAGGCAAAATCATCATTAAAACGCAGTCTTCAATTTCCCACTATGGAATTCGCCTTACTCTCAAAGGATCCGTCAACATGCAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAGTCACTCTATGGAGTTATTAAGCCAATCCCTATTTTGAATAGGACCATCGAGGTTAAACCTTCTGGAAAGATTGCTTCGGGCACAACAGAGATACCATTTTCAGTGACCCTTAGACAGCAAGGTGAAAATTTGGAAAAGTTTTATGAGACTTTCCATGGGGCAAATATAAGTATCCAGTATTTGGTGACTGTAGATGTGACTCGCGGATACTTACATAAATCTTTGTCAACAACAATGGAGTTCATTGTTGAAAGTGATAAAGCTGATCTTCTACAACGGCCAATTCCTCCAGAAATGGTCATCTTCTACATAACCCAGGACACTCAACGACACTCTCTACTTCCTGAATTAAAATCTGGTGGATTTCGGGTGATGGGGAAGATCTCTTCTCAGTGTTCTTTGGCTGGTCCTATTAGTGGTGAGTTAACTGTAGAAACATCTGCAGTTCCGATTCACTCAATCGACATTCAGTTGTTTCGTGTTGAGTCCATTCTTCTTGGGGAGAAAATTGCAACTGAAACATCTTTGATACAAACGACCCAGGCAACAGATGGAGATGTATGCCATAATTTGACTATGCCTATCTATGTAATACTTCCACGGCTTCTGACGTGTCCAACAACTTTTGCTGGTCCCTTCTCAATTGAGTTCAAAGTTGCCATTGTCATAAGTTTTCAGTCAGACCTATCTCAAGTGCATAAGAAGACTGACTCCAGAACTCCAAAACTTTGGCTAGCAATGGAAACATTGCCGCTCGAGTTGGTCCGGACAAAGTAA 951 0.4227 MSIDLKLSRFNRIYRPSEALEGKIIIKTQSSISHYGIRLTLKGSVNMQVRGGSAGVVESLYGVIKPIPILNRTIEVKPSGKIASGTTEIPFSVTLRQQGENLEKFYETFHGANISIQYLVTVDVTRGYLHKSLSTTMEFIVESDKADLLQRPIPPEMVIFYITQDTQRHSLLPELKSGGFRVMGKISSQCSLAGPISGELTVETSAVPIHSIDIQLFRVESILLGEKIATETSLIQTTQATDGDVCHNLTMPIYVILPRLLTCPTTFAGPFSIEFKVAIVISFQSDLSQVHKKTDSRTPKLWLAMETLPLELVRTK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02936 316 SUPERFAMILY E set domains 5 173 IPR014756 -
Aip05g02936 316 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26C 3 314 - -
Aip05g02936 316 Gene3D - 184 294 IPR014752 -
Aip05g02936 316 Pfam Vacuolar protein sorting-associated protein 26 11 282 IPR028934 GO:0006886
Aip05g02936 316 Gene3D - 2 144 IPR014752 -
Aip05g02936 316 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 3 314 IPR028934 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02936 Aip-Chr5 130985213 130989453 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02936 K25730 - gmx:100820593 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02936 05 130985213 130989453 Aip05g02936 05 130985213 130989453 ECH