Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02230 ATGGCTCCTGCTGCTTCTTCCTCCTCCTGGGTTCAACAACTGAGTTCGCTTGACTGGCACCAAGAGTCCTACCCTGCATTTAACGATTTCTCCGCTGTTCCCTTCTTCGCTCTCTTATTCCCCTCTGTTCGCTTCTTCCTCGACCGTTTCGTTTTCGAGAAAGTGGCCAGACGATTGATTTTCGGAAAGGGGCATGAGAAACTGGATCTTCAAACAGATGAGAGAAGAAAGAAGATTAGGAAATTTAAGGAATCAGCATGGAAATGTGTATATTTTCTATCAGCTGAAATTTTTGCTTTGTCTGTAACTTACAATGAGCCTTGGTTTACCAATACAATATATTTTTGGGTTGGGCCGGGAAATCAAATCTGGCCAGATCAAAAGATTAAGTTAAAACTGAAGGGGCTCTATATGTATGGTGCTGGATTTTATGCTTACTCCATACTCGCTTTAATATTTTGGGAAACTAAGCGCTCTGACTTTGGGCTGTCAATGACCCATCATGTTGCTTCTCTGGCTCTCATTGTGCTATCTTATATGTTTAGGTTTGTTCGTGTTGGATCAGTAGTTTTGGCTCTTCATGATGCTACTGATGTGTTTCTGGAGACAGGAAAAATGTCCAAATACAGTGGGGCTGACACAATGGCTAGCATTGCATTTCTCCTTTTTGTTATCTTTTGGACGTTATTGCGCATCATTTACTATCCATTTTGGGTTCTTTGGAGTACAAGCTATGAAGTTATTTCTGTATTCGATAAGGAGAAGCACCAGAAGGATGGGCCAATATATTATTATGTGTTCAATACTCTACTCTTCTGTTTGCTTGTTCTAAATATTTATTGGTGGGTTCTGATGCTTCGGATGCTTGCTGATCAAATCCGAGCAAAAGGAAAAGTTAGTGAAGATATTCGCTCTGATTCTGAAGATGATGATGATTACAATGACCATGAAGAATGA 957 0.4033 MAPAASSSSWVQQLSSLDWHQESYPAFNDFSAVPFFALLFPSVRFFLDRFVFEKVARRLIFGKGHEKLDLQTDERRKKIRKFKESAWKCVYFLSAEIFALSVTYNEPWFTNTIYFWVGPGNQIWPDQKIKLKLKGLYMYGAGFYAYSILALIFWETKRSDFGLSMTHHVASLALIVLSYMFRFVRVGSVVLALHDATDVFLETGKMSKYSGADTMASIAFLLFVIFWTLLRIIYYPFWVLWSTSYEVISVFDKEKHQKDGPIYYYVFNTLLFCLLVLNIYWWVLMLRMLADQIRAKGKVSEDIRSDSEDDDDYNDHEE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02230 318 ProSiteProfiles TLC domain profile. 80 294 IPR006634 GO:0016021
Aip05g02230 318 PANTHER LAG1 LONGEVITY ASSURANCE HOMOLOG 3 15 314 - -
Aip05g02230 318 Pfam TLC domain 81 287 IPR006634 GO:0016021
Aip05g02230 318 SMART lag1_27 80 294 IPR006634 GO:0016021
Aip05g02230 318 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 15 314 IPR016439 GO:0046513|GO:0050291
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02230 Aip-Chr5 104301383 104307680 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02230 - - gmx:100807444 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02230 05 104301383 104307680 Aip05g02230 05 104301383 104307680 ECH