Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02227 ATGGGCGATGCTTTGGGTTCTGATTTGATCAGTGATCTTCCTCAGAGCATCGTGGAGAGCATCCTGGTGCGGCTTCCAATAAGGGATGCTGTGAAAACTAGCATCTTATCGAGCAAATGGAGGTACAAATGGGCTTCCATTACTCAACTTGTCTTCGACGAAAAATGCGTCGATAGTTGCAGTGACCGAGATGTTGTTGAGAAAAGTGTTGTCAAGTTCATCACCAGATTGTTGTTTCTTCACCAAGGACCAATTCATAAGTTCCAAATCACGATTTCGTACTTTCAGAGCTGCCCCGAAATAGACCAGTGGATTCTTTTCCTCTCAAGGAATGATATTAAGGAGTTGGTTCTTGAATTAGGAGAAGGCGAATTCTTCAGGATACCATCCTGCCTTTTCAATTGTAAGAAATTGTCTCGCCTCGAGCTTTTTCGATGCGAGTTGGATCCGCCTCTTAGTTTTAAGGGATTCTTGTGTTTGAGGAGCCTAAACCTTCATCAAGTTCTGATATCGCCCGATGCAATCGAAGGCCTCATTTCCAATTGCCCTCTCTTAGAGAGCTTATCATTGTCGTACTTTGATAGCTTAGCTCTTAGTATCCGCGCTCCCAACCTCAAGTACTTGTATCTTGAAGGTGAATTCAGGGACATATGTCTTGAAGATACTCCACTTCTCGTTGAAATCTCCGTTGCTATGTATATGACTGATGACATCGCTGAGCACTTTGAGCAGAGCGCAAGTTGCAATTTTCTTAAGTTTCTTGGTGGCGTGCCTAACCTTGAAAGGCTTGTTGGCCATATCTACTTCACAAAGTATTTGAGCATAGGTAATGATCTAGGATGTCTTCCAATAATATACAAGAATTTGGAGACCATCGAGTTAAATCAAGTAAGTTTTGAAGATATGAAAGAGATACTCGTTGTTCTTCGCTTGATTACCAGCTCTCCCAATCTAAAGGAACTTCAAATTTCAGGTTCATCAAACATACCAAGTGCCACAGATGCACCAGACTTGGATTTTTGGGAGAAAGAGTGCTCTTCAAAATGTAGACTAAGCCATCTTAGAGTCGTGCAGTTGACAGATATGTGTGGTGTGCCACATGAGATGGAGCTTATCAAATTCTTGCTTGCCTCATCTCCTGTGCTCGAGACAATGAGTATCATTCCTTGTATATATGTTGTGGAAAGTCAATTAAAAATGTTAACCGAATTGGTGAAGTTCCGACGTGCTTCTGCCAAAGCAGAAATTGTTTTTGTCCGTGAGTAA 1266 0.4186 MGDALGSDLISDLPQSIVESILVRLPIRDAVKTSILSSKWRYKWASITQLVFDEKCVDSCSDRDVVEKSVVKFITRLLFLHQGPIHKFQITISYFQSCPEIDQWILFLSRNDIKELVLELGEGEFFRIPSCLFNCKKLSRLELFRCELDPPLSFKGFLCLRSLNLHQVLISPDAIEGLISNCPLLESLSLSYFDSLALSIRAPNLKYLYLEGEFRDICLEDTPLLVEISVAMYMTDDIAEHFEQSASCNFLKFLGGVPNLERLVGHIYFTKYLSIGNDLGCLPIIYKNLETIELNQVSFEDMKEILVVLRLITSSPNLKELQISGSSNIPSATDAPDLDFWEKECSSKCRLSHLRVVQLTDMCGVPHEMELIKFLLASSPVLETMSIIPCIYVVESQLKMLTELVKFRRASAKAEIVFVRE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02227 421 SUPERFAMILY RNI-like 105 331 - -
Aip05g02227 421 SMART 9598neu4hmm 348 419 IPR006566 -
Aip05g02227 421 PANTHER F-BOX PROTEIN-LIKE 7 402 - -
Aip05g02227 421 Gene3D Ribonuclease Inhibitor 55 407 IPR032675 -
Aip05g02227 421 Pfam FBD 346 387 IPR006566 -
Aip05g02227 421 PANTHER - 7 402 - -
Aip05g02227 421 SUPERFAMILY F-box domain 6 83 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02227 Aip-Chr5 104054178 104057307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02227 4 215 EF-hand Containing Proteins AT5G41840 23.361 1.17e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02227 - - gmx:100781833 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02227 05 104054178 104057307 Aip05g02227 05 104054178 104057307 ECH