Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02218 ATGAATTCTGTCGAAGGTGCTGCTGTTTCTACAATTCATGTTACTCCAGAAGATGGTTTCAGCTATGCAAGCTTTGAAACAGTGGGATATGATTTGAAAATGGTCAATCTGAACGATCTAGTTGAGAGTGTGTTGGCATGCTTCCAACCTACTGAGTTTTCGTTAGCGGTTCATGTTGACTGTTCAAGCAAGTCATTTGAGCAGAGCTGTTTGCTGGATGTTAAGGGATACTGTCGTGAAGAGAGGAGCCACGAGGGGATTGGAATGGGTGGTTCTGTTGTCTATCAGAAGTTCGTCAAGACTTCTGATTGTGGTTCACCTAGATCAACTCTGAAGTGCTGGAAAGATGAAGAGGAAGAAGAGTAG 366 0.4344 MNSVEGAAVSTIHVTPEDGFSYASFETVGYDLKMVNLNDLVESVLACFQPTEFSLAVHVDCSSKSFEQSCLLDVKGYCREERSHEGIGMGGSVVYQKFVKTSDCGSPRSTLKCWKDEEEEE 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02218 121 SUPERFAMILY S-adenosylmethionine decarboxylase 1 100 IPR016067 GO:0004014|GO:0008295
Aip05g02218 121 Pfam Adenosylmethionine decarboxylase 1 98 IPR001985 GO:0004014|GO:0006597|GO:0008295
Aip05g02218 121 Gene3D - 1 101 - -
Aip05g02218 121 Coils Coil 120 121 - -
Aip05g02218 121 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE 1 121 IPR001985 GO:0004014|GO:0006597|GO:0008295
Aip05g02218 121 PANTHER S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME 2 1 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02218 Aip-Chr5 103465460 103465825 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02218 K01611 - gmx:547981 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02218 05 103465460 103465825 Aip05g02218 05 103465460 103465825 ECH