Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g02143 ATGATGTTTAGCAAGGTCATTTATGAGGATCAACCGGAGCTAGAGGACGACGGCACGAAGGAGAAGCCATACGGAAAGATGAAATACGTTGCGGTTATTAAGGCAGAGATTTTCAAGAGCTTGGTGAACGGAGGGGTGTTGAAGGCTGAGAAATTCAAGAGTTTGTTGCATGATGGATATAATGGTAGTGAGAAATTCAGGTTCCTCCTTATGGTTGCAAGAAAGAAATCTTCATGGAAGGTTTGGGTGCTTAGAATTGCGTATTTGGTTCTTCTTTGGACCATCTTGGTGCAATTCAAGGACATCATTGGAGACATGGTTACACCAACGTCCTTTAAGACTCGCTCCTCGAATAATGGGTATCTAATGGTTTCTTCAAATGGAGGATTGAATCAAATGCGAGCAGGAATATGTGATATGGTGGCCATTGCAAGATATATGAATGTGACACTAATTGTTCCTGAATTGGATAATACCTCCTTTTGGAATGACTATAGCCAATTTGCAGATATATTCGATGTTGATTATTTCATCGATTCTTTGAGAGATGAAGTTCGGATATTGAGAGAACTGCCTCCTGAACAGAAGCACAAAGTGGAATCACAGTCCCTCTATTCCATGCCACCCATTAGTTGGTCTAATATGACATATTACTATGAAGTGATTATTCCTCGGATGAAAACATATGAGGTGGTACACTTCACAAAATCAGATGCAAGGCTTGCAAACAATGGAATTCCAGACGAAGTTCAGAAACTAAGATGCCGTGCAAACTACGATGCGTTGAGATTTACTCCCCCAATTGAGAAATTAGCAAAGAAGATCGTTGACATTCTTAGGTCCCGAGGCCCTTTCTTGTCACTTCATCTTCGATATGAAATGGATATGATTGCTTTCTCCGGTTGCAATGAGGGTTGCACTCACGAAGAGATTGATGAACTAACCAAAATGAGGTATGCTTATCCATGGTGGAAAGAGAAGGAGATAGATTCAGAGAAGAAAAGGTTAGATGGCCTGTGCCCTCTTACTCCTGAGGAAACAGCTCTAACACTTCGTGCATTGGGCATTGATCGCAACATTCAAGTTTATATTGCTGCTGGTGATATATACAAATATGAGAAAAGAATGGAAATGCTCCACGACTCCTTCCCAAATTTGGTGAAGAAGGAGACATTATTGGAAGCCTCGGAACTTGACCCTTTCCGGAACCATTCAAACCGAATGGCTGCATTGGACTACTATGTGTCAATAGAAAGTGATATATTTGTTCCATCATACAGAGGCAACATGGCAAAACTCGTTGAAGGACACAGAAGGTATTTGGGGTACAAGAAAACAATTCTTTTAGACAAAAAAGCTCTGGTTGAGCTGATAGACCTGTACAAGAATGGAACAATAGGGTGGAACGAGTTCTCCAATTCAGTGAAGGAAGCACACGCAGACCGCGTTGGGGGCCCCACTTCAAGATCTGTGGTCCCAGGCAAACCCAAGTTAGAGGACTATTTCTACACAAACCCACACGAGTGCATTCAGGAATAA 1539 0.4185 MMFSKVIYEDQPELEDDGTKEKPYGKMKYVAVIKAEIFKSLVNGGVLKAEKFKSLLHDGYNGSEKFRFLLMVARKKSSWKVWVLRIAYLVLLWTILVQFKDIIGDMVTPTSFKTRSSNNGYLMVSSNGGLNQMRAGICDMVAIARYMNVTLIVPELDNTSFWNDYSQFADIFDVDYFIDSLRDEVRILRELPPEQKHKVESQSLYSMPPISWSNMTYYYEVIIPRMKTYEVVHFTKSDARLANNGIPDEVQKLRCRANYDALRFTPPIEKLAKKIVDILRSRGPFLSLHLRYEMDMIAFSGCNEGCTHEEIDELTKMRYAYPWWKEKEIDSEKKRLDGLCPLTPEETALTLRALGIDRNIQVYIAAGDIYKYEKRMEMLHDSFPNLVKKETLLEASELDPFRNHSNRMAALDYYVSIESDIFVPSYRGNMAKLVEGHRRYLGYKKTILLDKKALVELIDLYKNGTIGWNEFSNSVKEAHADRVGGPTSRSVVPGKPKLEDYFYTNPHECIQE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g02143 512 Pfam GDP-fucose protein O-fucosyltransferase 121 441 IPR019378 -
Aip05g02143 512 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 39 511 - -
Aip05g02143 512 CDD O-FucT_plant 121 446 IPR024709 -
Aip05g02143 512 PANTHER OS02G0726500 PROTEIN-RELATED 39 511 - -
Aip05g02143 512 PIRSF UCP009360 99 507 IPR024709 -
Aip05g02143 512 PIRSF UCP009360 48 116 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g02143 Aip-Chr5 91398955 91406488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g02143 113 510 Miscellaneous Gene Families AT2G37980 48.130 1.00e-130 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g02143 K23280 - gmx:100818153 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g02143 05 91398955 91406488 Aip05g02143 05 91398955 91406488 ECH