Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01925 ATGGCAAAACCAAGTGCAGCTGATAATAGGACTAGAAGTTCTGTGCAGGTCTTTATAGTAGTTGGTCTGTGCTGTTTCTTCTATATATTGGGTGCGTGGCAGAGAAGCGGTTTTGGAAAGGGAGATAGCATAGCATTGGAGATCACCAAGAAAGGCCAAGAGTGTGACACAGTTCCAAATTTAAGTTTTGACTCTCACCATGCTGGTGAGGTTAGCAAGATCGATGAGGTCGATTCAGAAGCTAAGAAATTTGAGCCATGTGCTGCTAGATATACGGATTACACTCCGTGCCAAGATCAGCAGCGTGCAATGACATTTCCAAGAGAAAACATGAACTATCGAGAGAGGCATTGCCCCCCTGAGGGAGAGAAGCTACACTGTATGATTCCAGCACCCAAGGGGTATGTCACTCCATTTCCATGGCCAAAGAGCCGTGACTACGTTCCTTACGCAAATGCACCGTACAAGAGCCTTACAGTTGAGAAGGCTATTCAGAACTGGATCCAGTATGAAGGATCAGTGTTTAGGTTCCCCGGTGGTGGCACCCAATTTCCTCAAGGTGCAGATAAATATATCGACCAACTTGCTTCCGTGATCCCTATAAATGATGGGACAGTTAGGACAGCTCTGGACACTGGTTGTGGGGTTGCCAGTTGGGGTGCTTATCTTTGGAGCAGAAATGTTATTGCAATGTCATTTGCGCCAAGGGACTCTCATGAAGCACAAGTACAGTTTGCTCTTGAAAGAGGTGTACCTGCTGTCATTGGTGTTCTTGGAACCATAAAAACGCCTTATCCTTCTGCGGCCTTCGACATGGCTCATTGTTCTCGTTGCTTAATTCCTTGGGGAGCAAATGATGGAATTTATATGATTGAAGTAGACCGAGTTCTAAGACCTGGTGGTTATTGGGTGCTTTCGGGACCTCCAATAAACTGGAAGGCAAGTTATAGAAACTGGCAGAGACCTAAGGAGGAACTCGAGGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGCTCCTCTGCTGGGAGAAGAAGTCAGAGGAGGCTGAAATTGCCATTTGGCAAAAAACTATGGACACCGAATCATGCCGTAGCAGACAAGAAGAATCTGGCGTGAACTTTTGTGAAACAACCGATGTTAATGATGTCTGGTATAAGAAAATGGAGGCCTGTGTTACCCGCACACCTAAAGTTTCTGGTGAACTCAAGCCATTTCCCGAGAGGCTATTTGCAACCCCTCCTAGAATTGCTAATGGTGCAGTTCCTGGAGTTAGTGTTGAGACATTCGTGGAGGATAACAATAAGTGGAAAAGGCACGTAAATGCTTATAAGAAAATTAATAGCCTCCTGGATACTGGAAGGTATCGCAACATTATGGACATGAATGCTGGTTTGGGCAGTTTTGCCGCAGCTATTCAATCTCCAAAGTTATGGGTCATGAATGTTGTGCCTACTATTGCTGAGAAAAGTACACTGGGTGTCATATATGAACGAGGACTTATTGGCATCTATCATGATTGGTATGGTTTTCTTACTCAGTCACGATGA 1548 0.4483 MAKPSAADNRTRSSVQVFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKKGQECDTVPNLSFDSHHAGEVSKIDEVDSEAKKFEPCAARYTDYTPCQDQQRAMTFPRENMNYRERHCPPEGEKLHCMIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGSVFRFPGGGTQFPQGADKYIDQLASVIPINDGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKTPYPSAAFDMAHCSRCLIPWGANDGIYMIEVDRVLRPGGYWVLSGPPINWKASYRNWQRPKEELEEEQRKIEEVAKLLCWEKKSEEAEIAIWQKTMDTESCRSRQEESGVNFCETTDVNDVWYKKMEACVTRTPKVSGELKPFPERLFATPPRIANGAVPGVSVETFVEDNNKWKRHVNAYKKINSLLDTGRYRNIMDMNAGLGSFAAAIQSPKLWVMNVVPTIAEKSTLGVIYERGLIGIYHDWYGFLTQSR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01925 515 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 508 IPR004159 GO:0008168
Aip05g01925 515 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 508 - -
Aip05g01925 515 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 332 IPR029063 -
Aip05g01925 515 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 507 IPR004159 GO:0008168
Aip05g01925 515 Gene3D Vaccinia Virus protein VP39 161 380 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01925 Aip-Chr5 59429482 59433996 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01925 - - gmx:100778611 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01925 05 59429482 59433996 Aip05g01925 05 59429482 59433996 ECH