Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01919 ATGGTAATCATAGCATCCACTACTGCGAACAGCAACATGCATAACTTGCAAAATTTCGACTCTAATCAGAATAACAACCACCACCTCCGAAATGCTTCGATCTCTTCCTACTTGAACACCAATGAACAACAACAACCGACTTTTGTTGACTCGTCAAGCCAAAACTTCAACAGCAGAAAGGAGGGAGAACCTCTTCCTTTTCTTCAACATGGAATAATGAAGGAAGAAGACTGCGAAATCGGCGTCTTTGAGGCCGAAAAGTACTTTAACGGAGCAGAAGGAGGAGAGGTTCTGATGAGTCAAAGAAGAAAGAACCAATATCATCACCATTATTACGACCAGAAAAAAGATGAACAAAAATCTACGGAGACTGGAAAGTTCAACAACAGAAGCAGCAACAAGTTTGGAACACCGAGCAGCGTTCCTTCTGAATCAAGTTGGAACAGCCAAAGTGCACTGTTACAGAGTTCCTTGAAAGAATCTTCAAGACTCAAAAACAACAAGGTACAAAGAAATAAGGCTAGTTTTCTTGCAAACCTTGGATGCAAATGCTATTGTTCTGATAAAGATTCTGTTGCTATTAGCAACAACACTAGTAGCGCAAAAAAGAACTTGAATCCGGTTCTGGATACTAATAATCATCATCATCGTGATTCGGTTAAAGAAACTAATCCTCATGCAGAAGCAGAAATCTCGCTGGACAACAACAAAGAGAAGTTGTTGAACAGAGAAAACGCTTTATTAGCACTGAAGAAAATTCAACTTCAGGAAAAAGCAGAGAAATCAAGAAAATCATTGGAAGTGTTTGGTTCTCCAATCTTGAATCATTGCACGAGCAAGTCATTGAGCTTTGATAAAAGATTGGTAATGCATTCTTCTTGGGATGATGATGATGCTGATGCTGTTGTTCTTCCAAAAATAGAGGAAACTGATTTAGCAAAAAGAGAAAATGGAAACTACAACGATGATGATTGTGAGAGTGATGCAAGTTCAGATTTATTTGAAATTGATAGTCTCACAGGGAAGGCAAATAATCCCTTCCTTGTTAGACCAATTAGAACTTCTTGCGAAGTTATTTCCTTCTGTGCTAGCCCTGTCACAACGTGTTATGCGCCGAGTGAGGCTAGCATAGAATGGAGCGTGGTAACTGCGAGCGCATTTGAGTACTCGGCCATGTCTGATTGCGAAGATCAAAGGTCTGTTGCAACCCTTAGGAGTCCAGCTAGACCACAGCCGAAAGCTGGAAAAGAGGTGTATAAGCGGCGTCCGGGCATGCTGTTGGGCTGCAAGAGCCAAAAAGCAGTTGGAGTGGCCTCCGAAACCGTCAAGGCATCTGAGAAGCTGAGCCCCAACTCCCAATTTAGTCGCAAATTCGATAACATTAATCAAGTGGCAAGGTTTCAAGCAGAGACAAAGCAGGGAAAACCACCAATGCAACAACGTTCACACCCACCACATGCTTCCCAACTCTTGTGCATTTAG 1482 0.419 MVIIASTTANSNMHNLQNFDSNQNNNHHLRNASISSYLNTNEQQQPTFVDSSSQNFNSRKEGEPLPFLQHGIMKEEDCEIGVFEAEKYFNGAEGGEVLMSQRRKNQYHHHYYDQKKDEQKSTETGKFNNRSSNKFGTPSSVPSESSWNSQSALLQSSLKESSRLKNNKVQRNKASFLANLGCKCYCSDKDSVAISNNTSSAKKNLNPVLDTNNHHHRDSVKETNPHAEAEISLDNNKEKLLNRENALLALKKIQLQEKAEKSRKSLEVFGSPILNHCTSKSLSFDKRLVMHSSWDDDDADAVVLPKIEETDLAKRENGNYNDDDCESDASSDLFEIDSLTGKANNPFLVRPIRTSCEVISFCASPVTTCYAPSEASIEWSVVTASAFEYSAMSDCEDQRSVATLRSPARPQPKAGKEVYKRRPGMLLGCKSQKAVGVASETVKASEKLSPNSQFSRKFDNINQVARFQAETKQGKPPMQQRSHPPHASQLLCI 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01919 493 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 7 473 IPR039615 GO:0009638
Aip05g01919 493 MobiDBLite consensus disorder prediction 125 148 - -
Aip05g01919 493 MobiDBLite consensus disorder prediction 106 148 - -
Aip05g01919 493 MobiDBLite consensus disorder prediction 469 493 - -
Aip05g01919 493 MobiDBLite consensus disorder prediction 43 64 - -
Aip05g01919 493 MobiDBLite consensus disorder prediction 469 486 - -
Aip05g01919 493 MobiDBLite consensus disorder prediction 43 60 - -
Aip05g01919 493 MobiDBLite consensus disorder prediction 106 124 - -
Aip05g01919 493 MobiDBLite consensus disorder prediction 199 229 - -
Aip05g01919 493 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1 7 473 - -
Aip05g01919 493 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01919 Aip-Chr5 58543854 58545453 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01919 - - adu:107489381 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01919 05 58543854 58545453 Aip05g01919 05 58543854 58545453 ECH