Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01833 ATGCTCGCGGCGGTCTTAGGTGAACATGCACCGACAGAGATTAGGGCGGAGGGTGGGATGAACGCAGAAGACGGTTGGGACGCAGGGACGATTGTGGGCAGAGAGGCGACGAGACGGACGGTGCTTGAAACGAAGCCTTCCAAGACGAACGCCGTGGCGGCTGCAAGTCGGTCTTGGTGTGTTTCTCCGATTGTGGCCAAGCCACCACCACTGATGGCGGCAGTGTTCCCATGGGAGCGCGAGAATGGGATCGCACCAGAGAAGAAGCAGGATCAGAACGATGGGGCTGTTTCAGGCGCGGGGATGGCCGAAAATAGTGGCGACCGACGTGAACCGTGGAGGGGTGGCTGCGGGTTGGACGCATTGGCAGCGGCGGCGGGTGCATCTCTGGGCAGTGCAGTGGCCAACAAAGTTCAGTGGGTGCATTTCCTCTTCATCAATGAGAATGAGGAAAAGATGTTGCACCCTAGCCAAAGTTTAGTTTTTTACTTTGGACCAAAAGCTGGGCTAAGATCCGGCGAGGACACTATGCAGATCTTCATCCTCCGAACCAACGAGTCGCGACAGATGCGCTATTCAAAGAGTAGGCAGCTTTGCAGTGTGATTCCGCGAGGGGATGGGGTGAGGGAAACTTCCTGCAACTCCATTGATGCTGATTCAACAACTGAAGCTGAGTACATAGCAGCAAGTGAGGCAGCTAAAGAAGCTGTGTGGATGAAGAAGTTCATAAACGAGCTTGATGTGGTGCCTTCAATTAAAGAACCACTTCCATTACTGTGCGACAATAATGGAGCCATTGCACAAGCAAAAGAGCCAAGATCACATCAAAAATCTAAGCATATCTTGAGAAGAAAAAATATGGAGAAGGTTCTCACAAAAGCTTCAAGCTTGAAGATTGGAAGCTCGTGGATTACCAAGAAGGCCAAAGAAGAGTTCACTAACATCAGTGAAGACATTAGTACTTTCTCAAGCACAGTTGAAGAGAAGGCAAAATGGATTTTCAACAAGCTAAAAGGCAAGCCATTGAAAAGCCTATCAGATCTCCTCAAAGAGTACAACCTACCACCAGGGCTGTTTCCGCAAAACATAATCTGTTATGAGTTTGATGAAACAAATGGTAAGCTGATTGTGTACCTGCCGTCTTCGTGTGAAGTGAGCTTCAAGGACGCATCGGTTGTTAGGTACGCGACTCGAGTCAAAGGTATCCTTTCGAGGGGAAAGCTGTCGACAATAGAGGGAATGAAAACAAAGGTCCTTGTGTGGGTCAAGGTGACGAGTGTGACAGTTGAGGGTTACAAATCGGACAAGGTGTGGTTCACAGCCGGTGTGAAGAAGGCTAGGTCAAAAGATGCATATGATACACCTCGTGATGCTCTCAGAGTATCTGAATTCTGA 1395 0.4939 MLAAVLGEHAPTEIRAEGGMNAEDGWDAGTIVGREATRRTVLETKPSKTNAVAAASRSWCVSPIVAKPPPLMAAVFPWERENGIAPEKKQDQNDGAVSGAGMAENSGDRREPWRGGCGLDALAAAAGASLGSAVANKVQWVHFLFINENEEKMLHPSQSLVFYFGPKAGLRSGEDTMQIFILRTNESRQMRYSKSRQLCSVIPRGDGVRETSCNSIDADSTTEAEYIAASEAAKEAVWMKKFINELDVVPSIKEPLPLLCDNNGAIAQAKEPRSHQKSKHILRRKNMEKVLTKASSLKIGSSWITKKAKEEFTNISEDISTFSSTVEEKAKWIFNKLKGKPLKSLSDLLKEYNLPPGLFPQNIICYEFDETNGKLIVYLPSSCEVSFKDASVVRYATRVKGILSRGKLSTIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKARSKDAYDTPRDALRVSEF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01833 464 Pfam Protein of unknown function, DUF538 347 452 IPR007493 -
Aip05g01833 464 PANTHER T31J12.3 PROTEIN-RELATED 291 464 IPR007493 -
Aip05g01833 464 PANTHER - 291 464 - -
Aip05g01833 464 MobiDBLite consensus disorder prediction 85 111 - -
Aip05g01833 464 Gene3D - 323 464 IPR036758 -
Aip05g01833 464 SUPERFAMILY At5g01610-like 298 461 IPR036758 -
Aip05g01833 464 CDD RNase_HI_RT_Ty1 218 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01833 Aip-Chr5 43628614 43638543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01833 220 281 Receptor kinase-like Gene Family AT4G23160 40.323 4.93e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01833 - - gmx:100819569 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01833 05 43628614 43638543 Aip05g01833 05 43628614 43638543 ECH