Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01799 ATGTTCGAAGGTCGTTCCTGTGTGGTTTCGAGATTGTTTCCTAGCTCTTGCCAGGCAGAGAACAACTGGTCTTACATGAAATACCTGCCTGAGTTGGACATCAAGAATAATGGCAAGCGCCCTGCGGAAAATAATGCATCCGAGGATGAGAATCGTCCCAGGAAGTATACTAGGATGTTGGACTCCAAACAGAAATCCCTTGAGGATAATGAGAATTCTGTAGTTCCCCAAGAGGATCAGGAAACCATTGAGACATTGAGTATCTGCCAAGATGGCGAAGAAGCTGGTGATTGGACTGATGACCAGTCATTGGCTGAACAAGAACAGCATGATGATGATGATGATGATTCACTGGAATTTGGTGAGCATCAATCTGATCAACAGCAGCAGGGTGAACATGAGGATTTCTTGGATTCAAGTATTCATCAATCAGACAAAGAACAGCAAGAGGATGAACTTGTGGCGGAGGATTCATTAGATTCTGGTGTTCGGCAATCGAATGAAGAACAGCAGCGGGGTGAACTCAGGGATTTATTAGATTCCGGTGTTCAGCTTGAGCTTGCTGTGAATTTATTGGAATCATGTGGTCAGCAATCTGATGACCACCAGCAGAACCATGCTGGGGGTTCATCAGATTCTGGCTCTCTCTTGCCACGCATGAACCGGGACAGCTCAATCACCTGTCTCAGCCGTTGCTCAAGGTCAGATTATGGCTCTCTTGCCTCTCTGAATAGGGGCTTCCGCAATGTAATCCGAAGCGGTGAGCTTTATAAATGGAGGAGACTAAATGGTATCATGGAACATTGGATTTATTTCTCCTATGCTCTCCTTGAATGGGAGGCCTATGATCCGATCCGTCAGCGATGGATGCATTTGCCAAGGATGGCCTCTAATGAGTGCTTCATGTGTTCGGATAAGGAATCTTTAGCCGTAGGTACCGATCTTCTTGTATTTGGGAGGGAGCTGCAATCCCTTGTTATATACAGATATAGTCTTTTGACAAACTCGTGGTCCTCCGGAATGAGGATGAATGCTCCGAGATGCTTGTTTGGCTCTGCTAGCCTTGGAGAGGTTGCAATCTTAGCTGGTGGGTGTGATTCTGATGGGCGTATCCTTGACTCTGCAGAGCTATACAATTCTGAGACTCAAACATGGGAATTACTCCCAAGCATGAAGAAACCCCGGAAGATGTGTTCCGGGGTATTCATGGATGGGAAGTTTTATGTTATAGGTGGAATTGGAGGAAGCGAGTCGAAGCTTCTTACATGTGGTGAGGAGTATGATTTACAGACTAGGACTTGGACCGAGATTCCTAGCATGTCCCCTGGACGTAGCAACAGGGGGTCGGAGATGCCTGCAATGGCCGAGGCACCTCCGTTGGTTGCGGTTGTAAATAATGAATTGTATGCTGCTGATTATGCTGACATGGAGGTTAAGAAATACGATAAGGAAAGAAAATTGTGGATTGTGATTGGGAGACTGCCGGAGCGGGCAGTATCAATGAATGGTTGGGGTCTTGCATTCAGGGCCTGCGGAAATAGGCTTATGGTTATTGGTGGACCTAGAACTCACGGCGAGGGCTTCATCGAACTCAATTCATGGGTGCCGGGTGAAGGTCCTCCGCAGTGGAATCTACTCGCTAGAAAACGGTCCGGTAACTTTGTCTATAACTGCGCCGTGATGGGATGCTGA 1692 0.471 MFEGRSCVVSRLFPSSCQAENNWSYMKYLPELDIKNNGKRPAENNASEDENRPRKYTRMLDSKQKSLEDNENSVVPQEDQETIETLSICQDGEEAGDWTDDQSLAEQEQHDDDDDDSLEFGEHQSDQQQQGEHEDFLDSSIHQSDKEQQEDELVAEDSLDSGVRQSNEEQQRGELRDLLDSGVQLELAVNLLESCGQQSDDHQQNHAGGSSDSGSLLPRMNRDSSITCLSRCSRSDYGSLASLNRGFRNVIRSGELYKWRRLNGIMEHWIYFSYALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTDLLVFGRELQSLVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEVAILAGGCDSDGRILDSAELYNSETQTWELLPSMKKPRKMCSGVFMDGKFYVIGGIGGSESKLLTCGEEYDLQTRTWTEIPSMSPGRSNRGSEMPAMAEAPPLVAVVNNELYAADYADMEVKKYDKERKLWIVIGRLPERAVSMNGWGLAFRACGNRLMVIGGPRTHGEGFIELNSWVPGEGPPQWNLLARKRSGNFVYNCAVMGC 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01799 563 MobiDBLite consensus disorder prediction 69 87 - -
Aip05g01799 563 Gene3D - 263 541 IPR015915 GO:0005515
Aip05g01799 563 SUPERFAMILY Kelch motif 276 559 IPR015915 GO:0005515
Aip05g01799 563 MobiDBLite consensus disorder prediction 94 120 - -
Aip05g01799 563 Pfam Kelch motif 394 441 IPR006652 GO:0005515
Aip05g01799 563 Pfam Kelch motif 346 391 IPR006652 GO:0005515
Aip05g01799 563 MobiDBLite consensus disorder prediction 35 173 - -
Aip05g01799 563 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 563 - -
Aip05g01799 563 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 563 - -
Aip05g01799 563 MobiDBLite consensus disorder prediction 196 218 - -
Aip05g01799 563 MobiDBLite consensus disorder prediction 126 149 - -
Aip05g01799 563 SMART kelc_smart 358 405 IPR006652 GO:0005515
Aip05g01799 563 SMART kelc_smart 406 454 IPR006652 GO:0005515
Aip05g01799 563 SMART kelc_smart 314 357 IPR006652 GO:0005515
Aip05g01799 563 MobiDBLite consensus disorder prediction 35 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01799 Aip-Chr5 40875132 40877468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01799 223 437 EF-hand Containing Proteins AT4G39560 26.941 7.11e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01799 - - adu:107489235 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01799 05 40875132 40877468 Aip05g01799 05 40875132 40877468 ECH