Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01738 ATGAGAGAGAGGATTGGAGTGACCACTGCACACACAAGTAAAGCCACCATGGCGTTCAAGATCAAGAACGCCCCATCTTTGCTCTTCCTCTTCACGTTCTTCTACAACATTGCATGCTCACCCTTCAACCCAGAACCGATGGCTGCAACCACGGGAGGCCACTGGGTTCAGCTGCAAAGAAGCATAGGCATCTCCGCCATGCACATGCAAGTAATGCGAGATAACAAGGTAGTTATCTTCGACCGTACAGACTTCGGTCCTTCAAACATCTCCCTCCCATTCAGCCGCTGCCGCTTCAACCCCCGCGACATGGCCTTGAAACTCGACTGCACCGCCCACTCCGTCCTCTACGACCTCTCCCTCAACACCCTCCGCCCACTCACCATCCTCACCGACGCATGGTGCTCCTCCGGCGCTCTCTCCCTCGACGGCACACTCTTCCAAACCGGCGGCTTCAACGACGGCCACAACAAGCTCCGCACCTTCTCACCCTGTCCTCAGCACCCTGAAACCTGCGACTGGCTCGAACTTCCATGGAACCTAACTTCCTCCCGCTGGTACGCTTCGAATCAGATCCTCCCCGACGGAAGAATCATCGTCCTTGGTGGAAGAAACTCCTTCACCTACGAATTCGTCGATCCCAACAGCATCTTCACTGCACCGGAAAACCCTAACTCTTTCTTCTTCCTCAGATTCTTGAAGGTCACGAGGGATAGCAACCCCGGCGAGGAGAACAATCTTTATCCGTTCTTGCACCTTCTCCCCGACGGGAACCTCTTCGTCTTTGCTAACCGGAGATCCATCTTGCTCGACTACAAACGCAACATTGTCCTCCGCGAGTTCCCGGTGATACCCGGAATAGAAAAACGGAACTACCCTAGCACCGGCTCGTCGGTCTTGCTTCCGATTCATCTCTCCGGGTTGGACGACCCGACCCGATTACCCCACGCGGAAATTATGATATGCGGCGGCGCGTTTCCCGGCGCGTTCAATTTGGCCAACATTAACAAGATCTTCATTGAGGCTTCGAGGACATGCGGTCGGATTCGGGTGACCGACCCTGAACCCAAATGGATCATGGAGACGATGCCGTTTCCACGTGTCATGCCGGATATGGTTCTTCTTCCAACGGGTGACGTCGTTATAATTAATGGCGCGGCGAACGGAACTGCTGGGTGGGAAAATGCAGCGAACCCCGTTCGGTATCCGGTTTTATATAAACCCGGTTTACATGAACCGTTATCCCGGTTCGAGATACTGGCGCCGGCGAAGACCGCTAGGATGTATCATTCTTCAGCTGTGTTGGTGCCAGATGGCAGAATATTAGTGGGTGGGAGCAACCCACATAGAGGTTATGATTTTCAGGCGTACCCGTACCCGACAGAGTTGAGTTTGGACGCTTATTATCCGGATTATTTGGGACCCGAATTCGAAACCCTAAGGCCTTCGATTATTGCGGTCGAAGCTACGAATAATACGGCGTCGTATGGTGGTAATTTTTCTGTTACGTTTTCGTTGCGGCGTTCTTTGGCTGGGATTAGTGTGGCCCTTGTGGCGCCATCGTTTACGACGCACTCTTTCTCGATGAACCAGCGTGTGGTGGTGCTCCACGTTGCGGCGTTGCAGGAGGTGGCGGCGTCCGAGTTTAAGGTGACGGCGCGTGGACCGCCTTCGCCGACGGTGGCGCCGCCTGGGTATTACATGGTGTTTGTCGTGCATGCAGGGGTTCCCAGTGTAGCTGTTTGGGTTCAGGTTAAGTGA 1761 0.5417 MRERIGVTTAHTSKATMAFKIKNAPSLLFLFTFFYNIACSPFNPEPMAATTGGHWVQLQRSIGISAMHMQVMRDNKVVIFDRTDFGPSNISLPFSRCRFNPRDMALKLDCTAHSVLYDLSLNTLRPLTILTDAWCSSGALSLDGTLFQTGGFNDGHNKLRTFSPCPQHPETCDWLELPWNLTSSRWYASNQILPDGRIIVLGGRNSFTYEFVDPNSIFTAPENPNSFFFLRFLKVTRDSNPGEENNLYPFLHLLPDGNLFVFANRRSILLDYKRNIVLREFPVIPGIEKRNYPSTGSSVLLPIHLSGLDDPTRLPHAEIMICGGAFPGAFNLANINKIFIEASRTCGRIRVTDPEPKWIMETMPFPRVMPDMVLLPTGDVVIINGAANGTAGWENAANPVRYPVLYKPGLHEPLSRFEILAPAKTARMYHSSAVLVPDGRILVGGSNPHRGYDFQAYPYPTELSLDAYYPDYLGPEFETLRPSIIAVEATNNTASYGGNFSVTFSLRRSLAGISVALVAPSFTTHSFSMNQRVVVLHVAALQEVAASEFKVTARGPPSPTVAPPGYYMVFVVHAGVPSVAVWVQVK 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01738 586 Pfam Galactose oxidase-like, Early set domain 481 585 IPR015202 -
Aip05g01738 586 PANTHER SECRETED PROTEIN-RELATED 26 585 - -
Aip05g01738 586 Pfam Glyoxal oxidase N-terminus 67 324 IPR009880 -
Aip05g01738 586 SUPERFAMILY E set domains 478 585 IPR014756 -
Aip05g01738 586 Gene3D Immunoglobulins 480 586 IPR013783 -
Aip05g01738 586 PANTHER F14L17.20 PROTEIN 26 585 - -
Aip05g01738 586 SUPERFAMILY Galactose oxidase, central domain 99 473 IPR011043 -
Aip05g01738 586 Gene3D - 49 476 IPR037293 -
Aip05g01738 586 CDD E_set_GO_C 481 585 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01738 Aip-Chr5 34987728 34989761 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01738 - - cam:101500908 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01738 05 34987728 34989761 Aip05g01738 05 34987728 34989761 ECH