Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01690 ATGAATAGGGGGAAGCTACTGGACCCACTGCCACCGCTCCTTCTTCCCAACAGGCTCACCTTGCTCCAAGTTTTCATGGCGGTGATGCTCATCTACCTCCTCTTCATGACCTTCGAAATCCCACTCGCATTCAGAGCCGCCACCGTCTCCTCCACCGAAAGAGCCACCACCTTCGTCTTCCTCAGCGACGCATTCCCAGTCCCACTCGCAGAACCCGAATACCAGCCGACTCGACCCGAATTCCAACCCAAAAACAGAACTTTCTTCCCTTCCCCCAAAGTGTCCACATTGAGCTTCAATGACAGCTTCAACGGCGAGTTCTCTGAGCTTCACAAGGTCGCAAAGCAAGCCTGGGTCGCCGGCAGGAGGTTGTGGGAGGATCTTGAATCGGGGAAAGTGGAATCCGCTGCTCGTAGGTTCCGGGTCGAAAACGGGTCGGACAAGTGCCCGAATTCGGTTTCGGTTTCTGGGCCGGAATTCAAGAAGGGTGTGATGGTATTGCCGTGCGGGATGACGCTGTGGTCGCACGTGACGGTGGTTGGGACGCCGAGGTGGGCACATGCGGAGAGGGACCCGAAGATAGCGGTGGTGAAGGAAGGGGATGAAGCGGTTATGGTTTCGCAGTTCATGATGGAGCTTCAGGGTTTGAAGGCCGTTGAGAACGAGGAACCGCCGAGGATCTTGCATTTCAATCCGAGGGTCAAGGGGGACTGGAGCGGCAAGCCTGTGATCGAGATGAACACGTGCTATAGAATGCAATGGGGGAATGCTCAGAGGTGCGAGGGATGGAAGTCACGTGCCGATGAGGAAACTGGTGAGTGCGTGTTTTTGTTTTGTTCTTGTTGGCGGTTTGATGATGACAGCCACTCGGAAGAGTGGAAGGCAACATGGTGGTTGAACAGACTCATAGGGCGAAAGAAGGAGGTGACTGTTGACTGGCCATATCCTTTTGCAGAGGGGAAACTGTTTGTTCTTACCATAAGTGCCGGCTTGGAAGGTTATCATATTAGTGTCGATGGGAGGCATGTGACGTCCTTTCCCTATCGCACAGGCTTTGCTCTCGAGGATGCTACTGGACTATCCATAAATGGGGACATTGATGTGCACTCCATATTTGCCGCTTCTTTGCCTACGTCGCATCCTAGCTTTGCTCCACAGATGCATCTTGAAGTTATTCCTCAGTGGAAAGCTCCTCCTCTTCTCAATACGAATGTGGAGCTCTTCATTGGCATCCTTTCTGCTGGCAACCATTTTGCCGAACGGATGGCCGTGAGGAAGTCCTGGATGCAACACAAACTAATCAAATCTTCGCATGTTGTGGCTCGGTTTTTTGTCGCATTGCACGGAAGGAAGGATACAAATCTGGATATAAAGAAAGAAGCAGAGTATTTTGGCGATATTATTATAGTTCCCTACATGGATCATTATGACCTTGTTGTGTTGAAGACTATAGCTATCTGTGAATACGGGATTCGTACAGTGGCTGCTAAGTATATCATGAAGTGTGATGATGACACATTTGTTAGAGTAGATTCTGTTATAAGCGAAGCAAGAAAAGTTCAAAGTGATAGAAGTCTCTACATGGGAAATATGAATTACCACCACAGGCCTCTTCGCCATGGCAAATGGGCTGTAACGTATGAGGAATGGCTAGAGGAAGAGTATCCTACGTATGCTAATGGACCCGGTTACATAGTCTCATCTGACATTGCCCACTTCATTGTTTCCGACTTCGAGAAGCGTAGGCTAAAATTATTTAAAATGGAGGACGTGAGCATGGGAACGTGGGTAGAGCAATTCAACAGCACAAGGCCGGTAGAGTACATACACAGCTTGAAGTTCTGCCAGTTCGGCTGCATCGACGACTACTACACGGCACACTACCAATCACCGCGGCAAATGACTTGTATGTGGGATAAGTTGCAACAGCAAGGAAAACCACTCTGCTGCAACATGAGATGA 1962 0.498 MNRGKLLDPLPPLLLPNRLTLLQVFMAVMLIYLLFMTFEIPLAFRAATVSSTERATTFVFLSDAFPVPLAEPEYQPTRPEFQPKNRTFFPSPKVSTLSFNDSFNGEFSELHKVAKQAWVAGRRLWEDLESGKVESAARRFRVENGSDKCPNSVSVSGPEFKKGVMVLPCGMTLWSHVTVVGTPRWAHAERDPKIAVVKEGDEAVMVSQFMMELQGLKAVENEEPPRILHFNPRVKGDWSGKPVIEMNTCYRMQWGNAQRCEGWKSRADEETGECVFLFCSCWRFDDDSHSEEWKATWWLNRLIGRKKEVTVDWPYPFAEGKLFVLTISAGLEGYHISVDGRHVTSFPYRTGFALEDATGLSINGDIDVHSIFAASLPTSHPSFAPQMHLEVIPQWKAPPLLNTNVELFIGILSAGNHFAERMAVRKSWMQHKLIKSSHVVARFFVALHGRKDTNLDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIRTVAAKYIMKCDDDTFVRVDSVISEARKVQSDRSLYMGNMNYHHRPLRHGKWAVTYEEWLEEEYPTYANGPGYIVSSDIAHFIVSDFEKRRLKLFKMEDVSMGTWVEQFNSTRPVEYIHSLKFCQFGCIDDYYTAHYQSPRQMTCMWDKLQQQGKPLCCNMR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01690 653 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 163 374 IPR001079 GO:0030246
Aip05g01690 653 CDD GLECT 167 372 IPR001079 GO:0030246
Aip05g01690 653 Pfam Galactosyltransferase 420 600 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip05g01690 653 Gene3D - 397 640 - -
Aip05g01690 653 SMART Gal_bind_lectin_2 167 373 IPR001079 GO:0030246
Aip05g01690 653 Pfam Galactoside-binding lectin 164 372 IPR001079 GO:0030246
Aip05g01690 653 Gene3D - 162 372 - -
Aip05g01690 653 SUPERFAMILY Concanavalin A-like lectins/glucanases 165 372 IPR013320 -
Aip05g01690 653 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 13 653 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip05g01690 653 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE-LIKE PROTEIN 13 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01690 Aip-Chr5 31509596 31513020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01690 22 653 Glycosyltransferase AT1G74800 60.426 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01690 K20843 - gmx:100818349 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01690 05 31509596 31513020 Aip05g01690 05 31509596 31513020 ECH
Aip05g01690 05 31509596 31513020 Aip05g01690 05 31509596 31513020 PCT