Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01680 ATGGATCAGATGGCGTTTGTGACTCCGAGAGGGTCAATGTCGAGCATCGGAGACTCGACGGAGCTTGAGGTCAATCCCAATCTCACTCTCAGCGATAAGCTCAGGGTTTTCAAGAGTTCCTCCTTTGATCCCAATGCCTTCATCCAAACCAAATCCCGCGCCATGAATGAAAAGGAGATAAGGCATTTGTGTGTTTATCTTGTTGACCTGAAGAAGGCTTCTGCTGAAGAAATGCGGAAAAGTGTTCTTGCTAACTACTCAGCCTTCATTCGTACATCCAAAGAGATTTCGGATCTTGAGGGGGAGCTAGTTTCCATGAGAAATCTTCTGGTGACGCAGGCCGCATCAGTTCATGCTATAGCAGAAGGTTGTCAGCTTAGTACCTTGGTTGCTAGAAAAGAAAACTCGGACATGGAAGAGATACTAAGTCAAAAAACGGATCTATCCAAGACAGAGAAATGGCTGATAGAGTTTCTAGAAACGCTGGAGGTTTTATTAGCAGAGAAAAGAGTGGACGAAGCGATGGCTAAGTTGGAAGAAGGCAAAAAAATGGCAGAAGAAATTACTAGAGAGAAACTTCTGAGTCCAGTTTTGTTCCAGGCATTGGAAGATGCCCTTGCTGATAAGAAGAAAAAATTAGCTGATCAGCTAGCAGAGACTATGGGCCAGTCATCCACTCGAAACTCAGAAATTCGTTTCACAGCTTGGGCTTTGAAAAAGCTAGGAGACGGTCCTCGTGCTCACACATTACTACTAAATGCACACAAAGAAAAGTTGCAGCGTAAAATGAATGGTTTTGAGTCCACCAATGATGGAAGGGTTAAAGCGGCTGGTCAATACACAACTAGCCTTTCACAGCTTGTCTTTTCCATCATTTCACGAGCTGCAACAGATTCTTTGACAGTGTTTGGCAAACAAGAGCCTGCATATAGTTCGGAGCTGGTTACTTGGGCCGTAGGGCAGGTTGAGAATTGTGCTCTTCTCCTAAAGAAGCGCATCCTTGCCTCGGCTGCTGCTACAGGAAGCCTCAGAGTTGCAGTTGAAAGTGTTCATGTTTGCATGAGCCACTGTCAACTGTTGGAGGCTAATGGATTGGCCCTTTCCCCTGTCTTGCTCAAACACTTTAGACCATTAGTTGAGCAAGCATTGAACAATAATTTGAAAAGAATTGAACAAACCACTGCTGCAATTGCTCTTGGAGAGGAATGTAGTGCTCACAAATTCAACTCATTGGTTCAGGAACTTTTTGAAGATGTAGAACCTCTTGAAATCTTACAGTTAGATGGTCTTGCATATGAAGGCCTTCTACGGGTGTTCAACTCCTACATCAATCTGCTGATAAATGCATTACCAGGTTCGGTAGAAACTGAGAACCTGGAAGGTACATCAGTTCATAAAATTGTAAAGATTGCTGAGACTGAAGCACAACAGATAGCAGTGCTAGCCAATGCAATATTGCTAGCAGATGAATTAATCCCTCGTGCCGTTGTGAAGCTTTCACACAGCAGCAAAGGTGATGAGTCTCATAGAAAAGGATCAGACAAGCAACAAAGGCTTCCTGAACAGCGCGAATTGAAGAAGAGACTCCAGCGGGAAGTTGATCGCCTCAGAGACAGTTTCTGCAGGCAGCATGCTCTTGAGCTCATCTTTAATGAGGAAGGGGAAACACGCCTCAATGCAATGATGTATTTGAGTTTAGACGGACAAGGCCAACAACCTGAATGGTTTCCTTCTACAATTTTTCAGGAGCTCTTTGCAAAGCTTACAAGAGTGGCAACAATTGCAACAGATATGTTTGTGGGAAAGGACAGGTATGCAACCCTTTTGTTGATGAGACTTGCAGAGTCTGTGATCCTTTTTCTTGCTGATGACCAAACCTTCTGGGGAGAAGTAGAGACAGGCCCAACGCCTTTGGGTCCTCTTGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTGCATCCCAAGGTCGATATTTATCTCGTCATCTGCACCAATCTATCAAAGACATCATCAGTAAGGCTATTGAAGCTGTTGCTGCTACAGGACTAGATCCCAACAGTATATTGCCAGAGGATGAGTGGTTTGTTGAAGTTGCTCAGATTGCCGTAAAGACGTTAACTGGGAAAGCTGCCTTTGATATAGATGATGATGTCGGTAGCCCCTTT 2178 0.4408 MDQMAFVTPRGSMSSIGDSTELEVNPNLTLSDKLRVFKSSSFDPNAFIQTKSRAMNEKEIRHLCVYLVDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELVSMRNLLVTQAASVHAIAEGCQLSTLVARKENSDMEEILSQKTDLSKTEKWLIEFLETLEVLLAEKRVDEAMAKLEEGKKMAEEITREKLLSPVLFQALEDALADKKKKLADQLAETMGQSSTRNSEIRFTAWALKKLGDGPRAHTLLLNAHKEKLQRKMNGFESTNDGRVKAAGQYTTSLSQLVFSIISRAATDSLTVFGKQEPAYSSELVTWAVGQVENCALLLKKRILASAAATGSLRVAVESVHVCMSHCQLLEANGLALSPVLLKHFRPLVEQALNNNLKRIEQTTAAIALGEECSAHKFNSLVQELFEDVEPLEILQLDGLAYEGLLRVFNSYINLLINALPGSVETENLEGTSVHKIVKIAETEAQQIAVLANAILLADELIPRAVVKLSHSSKGDESHRKGSDKQQRLPEQRELKKRLQREVDRLRDSFCRQHALELIFNEEGETRLNAMMYLSLDGQGQQPEWFPSTIFQELFAKLTRVATIATDMFVGKDRYATLLLMRLAESVILFLADDQTFWGEVETGPTPLGPLGLQQLYLDMQFVMIFASQGRYLSRHLHQSIKDIISKAIEAVAATGLDPNSILPEDEWFVEVAQIAVKTLTGKAAFDIDDDVGSPF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01680 726 SUPERFAMILY Cullin repeat-like 146 383 IPR016159 -
Aip05g01680 726 MobiDBLite consensus disorder prediction 502 524 - -
Aip05g01680 726 PANTHER EXOCYST COMPLEX COMPONENT 8 12 399 IPR033961 GO:0000145|GO:0006887
Aip05g01680 726 PANTHER EXOCYST COMPLEX COMPONENT 8 403 725 IPR033961 GO:0000145|GO:0006887
Aip05g01680 726 Pfam Exocyst component 84 C-terminal 153 367 IPR032403 -
Aip05g01680 726 Coils Coil 199 219 - -
Aip05g01680 726 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 403 725 - -
Aip05g01680 726 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 12 399 - -
Aip05g01680 726 Coils Coil 519 539 - -
Aip05g01680 726 Coils Coil 171 191 - -
Aip05g01680 726 Pfam Vps51/Vps67 37 122 - -
Aip05g01680 726 Gene3D - 275 381 IPR042560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01680 Aip-Chr5 31322675 31333723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01680 K19986 - gmx:100787854 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01680 05 31322675 31333723 Aip05g01680 05 31322675 31333723 ECH