Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01679 ATGGAGAAATATCAGTATCAACTGATATTGAAAATAGTTTCACTGCTTTTAACAGTGAAAATTGCATTTGGAGAATGGTGCAGTTCACAAGACTTGGAAGGTTTGATTGGTTTCAAGAATGGAATTCAGATGGATACATCTGGAAGATTGGCAAAATGGGTTGGTCAAAGATGCTGTGATTGGGAAGGCATTGTATGTGATAATGCAACAACATCAGGAACAAGAAGAGTGACACAGATTCATCTTCCAGGGTTCATTTCCACAGATAAAGACTTGTTTCAAACCCAAATGATTGGTCACTTTTCACTTTCCATCACACTTCTCACCTCACTTGAAATCCTTGATCTTGGAGGCTTAGTAGGCCTCAGTGGAACAATTCCACAAACACTTGGCATGCATCTGCAAAAGCTCCAAAAGCTTTACCTTTATGGAAACAACTTAACAGGCTCAATTCCAGAAAGCATTGGTACATTACCACTCTCACTTGGGAACTTGACAAATTTGGTAGAATTGGATCTTCATGAAAATTCCATCAATGGTCACATACCAAATAGCATTGGTCAGATGCAGAATCTTGAAAAGCTTGACCTTTCAAGCAATTTGCTAAATGGGAGAATCCCTTCATCATTATCCAATTTAACTTCCATTTCACTTTTGTATTTGGACACAAATAATCTTGAGGGAACAATCCCATTCCCTTCAAGAAATGGTGGTGAAAATATGCATTCTTTAGGGTTCTTGAGGCTCAATGATAACAATCTAAGTGGAAATTTACCTTTCAATTTCGGTCAACTTGTTTCTCTTCAAAGGGTATCATTGTCAAACAACAAACTTGAAGGTGCATTGCCTTCAAGTTTGGGGAATTTGCATCATTTGACTGAGATTTACCTAAGTGGAAACTTTTTCTCTGGCCAAATACCAAAATCATTAGGCCAAATTTCTCACCTCATAATGTTCAACATTTCCAAAAACTTGATTCAAGGGCCATTGCCAAAAGAGATGTCAAACCTTCAAAATCTTCAAAAAATTGATCTCTCTTTCAACCCTTTGAACCTCACTTCCATCCCCGAATGGCTGCCAAGTCTATTGTCGCTCTCTGGCATTTACCTTGCAGGCTGTGGAATCCAAGGCCGAATTCCAGAAGTTTTGAATACAATCAAAAGTCCAATTCAGGAATTGGACTTATCAATGAACTTTCTCAGTGGAAGCATACCTTCATGGATAGGTTCCTTCAGCCAACTCTACTTATTGAACCTCTCAAGAAACTCACTTGATTCATTCATCCCTCATTCCGTTGCGAAATTGCGCAATCTTGCAATTCTTGATCTTCACTCAAATAGGCTTACAGGATCCATAATTGAGGCATTTGAAATTGAACAAGATTCCACTGGAGGATCACTAACATACCTGGATCTTTCACATAACAATTTCTCTAGTGGAGTTGAAGAAATTGGTGTAGGAGGGCAATTCAACATTCAATTTCTGAATCTTTCTCACAACAATCTGAAGGGTATGTTGTCAAGTTCACTTGGGAGGCTAAAATCCATTCACAGTTTGGACTTGAGCTTCAACAAGTTAGCATCAAATTTGCCAGAGTTTCTTGCAAATTTGACCACATTGGAGATACTTAGGCTGCAAAAGAATCACTTTAGTGGCAACATTCCTAATGCATTTCTCAAGCTTAGAAAGTTGAAGGAGTTGGATCTATCAGATAATGTTCTTGAAGGGGAAATTCCAGAGGGTGAACCTCTGATTAACTTCCCTGGTAGTTCTTATTCTGGTAACAAAGGTTTGTGTGGAAAGCCTCTTGGTCCTTGTAAACTCTGA 1827 0.3859 MEKYQYQLILKIVSLLLTVKIAFGEWCSSQDLEGLIGFKNGIQMDTSGRLAKWVGQRCCDWEGIVCDNATTSGTRRVTQIHLPGFISTDKDLFQTQMIGHFSLSITLLTSLEILDLGGLVGLSGTIPQTLGMHLQKLQKLYLYGNNLTGSIPESIGTLPLSLGNLTNLVELDLHENSINGHIPNSIGQMQNLEKLDLSSNLLNGRIPSSLSNLTSISLLYLDTNNLEGTIPFPSRNGGENMHSLGFLRLNDNNLSGNLPFNFGQLVSLQRVSLSNNKLEGALPSSLGNLHHLTEIYLSGNFFSGQIPKSLGQISHLIMFNISKNLIQGPLPKEMSNLQNLQKIDLSFNPLNLTSIPEWLPSLLSLSGIYLAGCGIQGRIPEVLNTIKSPIQELDLSMNFLSGSIPSWIGSFSQLYLLNLSRNSLDSFIPHSVAKLRNLAILDLHSNRLTGSIIEAFEIEQDSTGGSLTYLDLSHNNFSSGVEEIGVGGQFNIQFLNLSHNNLKGMLSSSLGRLKSIHSLDLSFNKLASNLPEFLANLTTLEILRLQKNHFSGNIPNAFLKLRKLKELDLSDNVLEGEIPEGEPLINFPGSSYSGNKGLCGKPLGPCKL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01679 608 Gene3D Ribonuclease Inhibitor 237 315 IPR032675 -
Aip05g01679 608 SMART LRR_typ_2 337 362 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 561 583 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 537 560 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 465 487 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 289 313 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 165 188 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 513 536 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 265 288 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 189 213 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 435 458 IPR003591 -
Aip05g01679 608 SMART LRR_typ_2 134 158 IPR003591 -
Aip05g01679 608 SMART LRR_sd22_2 189 215 - -
Aip05g01679 608 SMART LRR_sd22_2 513 532 - -
Aip05g01679 608 SMART LRR_sd22_2 561 589 - -
Aip05g01679 608 SMART LRR_sd22_2 165 180 - -
Aip05g01679 608 SMART LRR_sd22_2 265 291 - -
Aip05g01679 608 SMART LRR_sd22_2 337 354 - -
Aip05g01679 608 SMART LRR_sd22_2 134 157 - -
Aip05g01679 608 SMART LRR_sd22_2 435 458 - -
Aip05g01679 608 Pfam Leucine rich repeat 515 574 IPR001611 GO:0005515
Aip05g01679 608 Pfam Leucine rich repeat 390 448 IPR001611 GO:0005515
Aip05g01679 608 Pfam Leucine rich repeat 167 226 IPR001611 GO:0005515
Aip05g01679 608 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Aip05g01679 608 ProSiteProfiles Leucine-rich repeat profile. 563 585 IPR001611 GO:0005515
Aip05g01679 608 SUPERFAMILY RNI-like 114 478 - -
Aip05g01679 608 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 156 607 - -
Aip05g01679 608 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 9 159 - -
Aip05g01679 608 Gene3D Ribonuclease Inhibitor 316 608 IPR032675 -
Aip05g01679 608 SUPERFAMILY L domain-like 466 603 - -
Aip05g01679 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 159 - -
Aip05g01679 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 156 607 - -
Aip05g01679 608 Gene3D Ribonuclease Inhibitor 158 236 IPR032675 -
Aip05g01679 608 Gene3D Ribonuclease Inhibitor 28 157 IPR032675 -
Aip05g01679 608 Pfam Leucine Rich Repeat 136 156 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01679 Aip-Chr5 31305263 31307212 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01679 2 608 Receptor kinase-like Gene Family AT4G08850 29.275 6.78e-67 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01679 - - gmx:100799647 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01679 05 31305263 31307212 Aip05g01679 05 31305263 31307212 ECH
Aip05g01679 05 31305263 31307212 Aip05g01679 05 31305263 31307212 PCT