Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01633 ATGTCACTCCCGTCTTCCAGGCGCAACTCGTTCAGCGGCCCGCCCCAACTCGCCGCCACGTCACCGGGGTCAACTCAGGACCTCCGCCAGCGAGTCATCATGCTTCTCAACAAGCTTTCCGACCGCGACACCCTCGCCATCGCCACGGCGGAACTCGAGTCCATCGCCAGAACTCTTAGCCCCGAGTCCTTCTCCTCCTTTCTCTCTTGCATCCACAACACCGATTCTTCTTCCAAATCGCCGGTCCGGAAGCAATGCGTTAACCTCCTCTCACTCCTCACGCGCTTCCACGGCGACGCACTAGCTCCATTTTTGTCCAAGATGATTGCAACCGTGCTCCGCCGCCTACGCGACTCTGACTCAGCCGTCCGATCTGCTTGCGTCGACGCCGTCTCCACCATGTCATCGGCGCCGCGCTCTGCCTTGCCNNNNNNNNNNNNNNTTGCCGCCGCCGTCGAGGCTGCGCCGGAGCCGGACGCGGAGGCACTTCGGCGTAGCGCGATGCCGCGGCTCGGGAAGCTCGCAAAGAGCGAAGTCTGCAAGGCAAAGGCCGCGCTCCTGGTGCTGATTGGAAGCGTTGTCGGCGCCGGCGGTGCGTCGAGCAGCGGCGTGCTGAACTGGCTAGTGCCGTGCCTGGTGGAGTTCCTGAGCAGCGAGGACTGGACGGTGAGGAAGGCAGCGGCGGAGGCGCTCGGTAAGGTCGCTACGACGGAGAGAGATTTGGCGTCGCGGCACAGGGCTCTGTGCTTGGATTCCTTGCAGAATCGTAAGTTTGATAAGGTGAAAGTTGTTAGGGAATGCATGAATCGTGCGTTGGAGATGTGGAAGGAGGTAGCTGATGATACATCTGAGGATGCGTTTTCTCCTGCTAAGTCTACATGTTCTTCATTTGGTCCAGATGATAGTAAAGGCCATTGTGTCAATTTTGGCTCTAAATTTTCTCAACCGAAGAAGACAGTCCCTGTAAACAGGTCCCCTCCATCTACACATTCATTCGCATCTTCCGTAGAAAGAGAGAAACCTCTGAAGAATAATAACAAGGACTCAAGAATCAGGATATTGCATCAGCAGGATGACAACAAATTCTCAGATGAGAAACTTGTAACTCCAGTCTCAAAGTCCCCCAATTCGAAAGTGTCTAAGGAAGATGTCATTAAGACGTGTGATTTTGAAGTTTCTAAACCACCCCGAAACCAAAATGTTGTGAACTCAAGGCAAGAGATAAAGCGTGCTCTCTTTAGCAAGACTTCTGATGAGAAAGTTCAAAAATCTAGCGGTTTGAAATCACGTGTTGTTCCATGTTATGGGGATGAAAATATTGAGTCAGATGTTACTGTCAACAATGTAAATGAAGTTTGTGAGAGCCCACAAGATGCTGAGGATTTGTCATTGATTCGTGAACAACTTTTGCAAATCGAAAACCAGCAATCCAATCTGCTAGACCTCCTCCAGAGATTTATTGGAAGCTCCCAAAGTGGGTTGAATTCTCTGGAGACACGTGTAAATGGCTTAGAGATGGCCTTGGATGAAATATCATATGATTTAGCAGTATCAAGTGGAAGGATTCCCAACACGGATGCCACAGAAGACATGTGTTGCAAGCTTCCTGGTTCTGACTTCTTGAGTTCTAAATTCTGGAAGAAGACCGAGACTAGGTTCTCTTCATCGGGAAGCATATCATCACCTATTACAGCAACAGCTGATAAAGCTGATAGCAAACAAATGTTAACTACAACTAATCACAAAAGATTTCAGCATCGTAGGGGTGGATTCTTTGTAAACCCATTGTCAGATGTTGAAAGCGATTCAACCCATTTAGAACAGCATTCACACAAAATGGTCCAAGATGCTGAGAAAGCACAAAGTTACAATGCCAGCTGTTTTGATGGCATTTCACCAGCTGCTTGTGAAGCACTGAGGAACCAGAACATCAGGTCATCCGTGTAG 1947 0.4951 MSLPSSRRNSFSGPPQLAATSPGSTQDLRQRVIMLLNKLSDRDTLAIATAELESIARTLSPESFSSFLSCIHNTDSSSKSPVRKQCVNLLSLLTRFHGDALAPFLSKMIATVLRRLRDSDSAVRSACVDAVSTMSSAPRSALXXXXXXAAAVEAAPEPDAEALRRSAMPRLGKLAKSEVCKAKAALLVLIGSVVGAGGASSSGVLNWLVPCLVEFLSSEDWTVRKAAAEALGKVATTERDLASRHRALCLDSLQNRKFDKVKVVRECMNRALEMWKEVADDTSEDAFSPAKSTCSSFGPDDSKGHCVNFGSKFSQPKKTVPVNRSPPSTHSFASSVEREKPLKNNNKDSRIRILHQQDDNKFSDEKLVTPVSKSPNSKVSKEDVIKTCDFEVSKPPRNQNVVNSRQEIKRALFSKTSDEKVQKSSGLKSRVVPCYGDENIESDVTVNNVNEVCESPQDAEDLSLIREQLLQIENQQSNLLDLLQRFIGSSQSGLNSLETRVNGLEMALDEISYDLAVSSGRIPNTDATEDMCCKLPGSDFLSSKFWKKTETRFSSSGSISSPITATADKADSKQMLTTTNHKRFQHRRGGFFVNPLSDVESDSTHLEQHSHKMVQDAEKAQSYNASCFDGISPAACEALRNQNIRSSV 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01633 648 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 10 137 IPR033337 GO:0005874|GO:0008017
Aip05g01633 648 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 149 634 IPR033337 GO:0005874|GO:0008017
Aip05g01633 648 SUPERFAMILY ARM repeat 34 305 IPR016024 -
Aip05g01633 648 Gene3D - 147 303 IPR011989 -
Aip05g01633 648 MobiDBLite consensus disorder prediction 317 348 - -
Aip05g01633 648 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 10 137 - -
Aip05g01633 648 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 149 634 - -
Aip05g01633 648 ProSiteProfiles HEAT repeat profile. 208 246 IPR021133 -
Aip05g01633 648 MobiDBLite consensus disorder prediction 317 335 - -
Aip05g01633 648 MobiDBLite consensus disorder prediction 1 23 - -
Aip05g01633 648 Pfam HEAT repeat 208 235 IPR000357 GO:0005515
Aip05g01633 648 Gene3D - 17 145 IPR011989 -
Aip05g01633 648 Coils Coil 465 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01633 Aip-Chr5 29535990 29539585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01633 - - mtr:MTR_5g036950 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01633 05 29535990 29539585 Aip05g01633 05 29535990 29539585 ECH