Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01588 ATGTCCGATAGTGGTCGAGTTACCATTACTCTTGGCCGTAGTGGTCAGGTTGTCAAGAGGGATTTATCTTCAGCTGACGTATCGTATGCTTCTTCTCTTTCCTTGGCTGGAACTAAGCGGTCTGTAAGAGACAGAATTGGAAATAATGTAGATGGTTATGGACACAGCAACAACAAACGACACAGAGGAGATAATAGCATACAAAATGGGTTTGACGATGGGCGTATTGACAAAGATGATCTTCGGTTGAAGCTTATGCGCAAAAGTGCATCTAAGCGAGCTGAGAGCAATGGTGATAAGAGCCAGATAGATCTCCGTGAAAAACTGACCAAGGCAGTTCGTTCTCCAATGACCAGTTTTAATTCAAAGCAGCGTGAACTTGAACCAAGGGAAACAAGCATGATTAGGCGAATTCCCTCAGCTAGAAGTTCTGATGATTTAATGCGTATGGAATCCATGAGAAGCTCATACTCTCCTTGGACATTGGACCATATTAGGCGAAGATCACCAGATGGGTTTCCAAGTAGTTCCAGGAGGATTTCCCCTCAAAGAAATGTGGAAGACCTACAGAGGAGGCCACTAAATAGGACATATGAAAGTGTTACACCGGTACCTTATGTAACTAGGGATGTTGAATCTTCAAGGCCTCCTGGCACTACACCTGCATCTTTTGCGGCACGCTCAACAATGTCCACTTTGCCTCCTGTAACTGCTAAGCCTGTAACATCTCATCTTGGCCAACTTCCTCCATCAAGCAGTGTTGCACAAAGAGCTTCATATGTGGGTGACGAACAGCAATCTCACCAAACTGTTGATGGCCTGTTACATGCTCTAGGACTGGGAAAATATGCCATTCTCTTCAAGGCTGAAGAAGTAGATATGACTGCATTGAAGCAGATGGGAGAACATGACCTCAAGGAGCTTGGAATTCCTATGGGTCCAAGAAAGAAAATTCTTCTCGCTCTCTTGCCTCGTGCAAAACGTCAACAGTGA 993 0.4471 MSDSGRVTITLGRSGQVVKRDLSSADVSYASSLSLAGTKRSVRDRIGNNVDGYGHSNNKRHRGDNSIQNGFDDGRIDKDDLRLKLMRKSASKRAESNGDKSQIDLREKLTKAVRSPMTSFNSKQRELEPRETSMIRRIPSARSSDDLMRMESMRSSYSPWTLDHIRRRSPDGFPSSSRRISPQRNVEDLQRRPLNRTYESVTPVPYVTRDVESSRPPGTTPASFAARSTMSTLPPVTAKPVTSHLGQLPPSSSVAQRASYVGDEQQSHQTVDGLLHALGLGKYAILFKAEEVDMTALKQMGEHDLKELGIPMGPRKKILLALLPRAKRQQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01588 330 SMART SAM_4 263 328 IPR001660 GO:0005515
Aip05g01588 330 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 3 329 - -
Aip05g01588 330 Gene3D - 261 330 IPR013761 -
Aip05g01588 330 MobiDBLite consensus disorder prediction 55 73 - -
Aip05g01588 330 SUPERFAMILY SAM/Pointed domain 267 322 IPR013761 -
Aip05g01588 330 MobiDBLite consensus disorder prediction 112 132 - -
Aip05g01588 330 ProSiteProfiles SAM domain profile. 266 329 IPR001660 GO:0005515
Aip05g01588 330 MobiDBLite consensus disorder prediction 45 73 - -
Aip05g01588 330 Pfam SAM domain (Sterile alpha motif) 265 322 IPR001660 GO:0005515
Aip05g01588 330 PANTHER OSJNBA0060P14.15 PROTEIN 3 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01588 Aip-Chr5 28105327 28112465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01588 265 322 Glycosyltransferase AT3G07170 60.345 3.20e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01588 - - gmx:100797199 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01588 05 28105327 28112465 Aip05g01588 05 28105327 28112465 ECH