Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01538 ATGGCTACTCGTGGAAAGCTTGAGGTAGACATTGAACTGAAGTCAAGTGCAGATAAATTCTGGAAAACAATTAGGGAGTCCACAGAAATATTCCCTAAGGCTTTTCCACATGATTACAAAAGCATTGAGGTTCTTGAGGGTGATGGCAAGGCTGCTGGTTCTGTCCGCCATATCACTTATGGTGAAGGGTCATCATTGGTGAAATCATCAAAAGAGAGGATAGAAGCTGCGGATGATGAGAAGAAGACAGTGAGCTATGCGGTGATCGAAGGTGACCTCTTAGAGTACTACAAGAAGTTCAAGGGACACATTGCCGTCACAACCGCCGACAATGGCTGCGAGGTTAAATGGACGGCTGAGTACGAAAAGACCTGCCATGAGATTCCCGATCCATCCGCCGTTAAGGACTTTGCCGTCAAGAACTTCCTCGAGGTCGATCAATACCTTATTCAACAAGCAGCTTCTTAA 468 0.4594 MATRGKLEVDIELKSSADKFWKTIRESTEIFPKAFPHDYKSIEVLEGDGKAAGSVRHITYGEGSSLVKSSKERIEAADDEKKTVSYAVIEGDLLEYYKKFKGHIAVTTADNGCEVKWTAEYEKTCHEIPDPSAVKDFAVKNFLEVDQYLIQQAAS 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01538 155 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip05g01538 155 PRINTS Major pollen allergen Bet V1 signature 51 60 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip05g01538 155 PRINTS Major pollen allergen Bet V1 signature 68 87 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip05g01538 155 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip05g01538 155 PRINTS Major pollen allergen Bet V1 signature 141 151 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip05g01538 155 SUPERFAMILY Bet v1-like 1 150 - -
Aip05g01538 155 Pfam Pathogenesis-related protein Bet v 1 family 2 151 IPR000916 GO:0006952
Aip05g01538 155 SMART Bet_v_1_2 2 152 IPR000916 GO:0006952
Aip05g01538 155 PANTHER MLP-LIKE PROTEIN 423 6 150 - -
Aip05g01538 155 CDD Bet_v1-like 5 149 - -
Aip05g01538 155 Gene3D - 1 152 IPR023393 -
Aip05g01538 155 PANTHER MLP-LIKE PROTEIN 423 6 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01538 Aip-Chr5 26228695 26230369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01538 - - gmx:100783267 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01538 05 26228695 26230369 Aip05g01538 05 26228695 26230369 ECH