Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01502 ATGAACAAACAACTCAATTTCAGCTGGCTCTTTATCCTAATCCTCTTCTTATCAACATCACCATTTCTTCTCAGTGTTTCCTCCGCCGCGGACGGCGGAGGCGGCGCCACCAACCCATTCACCCCGAAGGCCTCTCTGCTTCGCTATTGGGACAAGGAGATCCGCAACAACCTCCCGAAGCCAAACTTCCTCCTCTCAAAGGCGTCCCCGTTAACCGCCGTAGACGCAGCCGCATTCTCAAAACTCGCCGGCTCCGGAGGCGGAATCGCACTCTCTACGCGCCTCCCGGAGTTCTGCGCCGCCGCGAACCTCCTCTGCTTCCCGGACCTTGGAGCCTCGCTCGAGAAGCACGACAAGGACGCCAACTTCGCCGGCTACGGAGACAAGAACTTCACCAACTACGGAACAAGTCGACCCGGTGGTTCCGACGCATTCAAGAAGTACTCCGACGACGCCAACATCCCCGTCAACGACTTCCGCCGCTACGGCCGCGACTCCGCCGGCCATTCCGAGAGTTTCAGCAGCTACGCCACCGACGGCAATGTTGTCGATCAATCCTTCCACACCTACGGCTCCAGCGCCGCAGGAGGAGGCGGTGATTTCCGCGGCTATGCCTCCGGTGTCAACGTCCCTAACCTGGGGTTCACATCCTACTCTGATCACGCCACCGGAAGAACCCAATCCTTCAATTCATACTCAGAAAACGGCAATGCTGGACAACAATCCTTCACCTCTTATGGCAAAAACGGGAACAAACCCGAGAACACGTTCACAGGGTACGGAACTGAGTCCAACGTTGTCGGGTCCGGGTTCTCTAACTATGCTGAAACCGCCAACGCCGGCAACGACACGTTCAAAGGGTACGGCGTGAATATGAACAACCCAACCAACACTTTCTCAAACTACGCCAGCGGCGGAAACGGCGCCGTGGAGAGCTTCACCACCTACAGAGAGCAATCCAATGTGGGTGCAGATTCTTTCACCTCTTACGCCAAAGGCACCAACGCCGCCAAAGTGGAGTTCAGCAACTACGGAAAATCGTTCAACGAAGGAACTGACACGTTCTCAGGCTACGGAAAAGGTTCCACCGGAAAAACCGAGGTTGGGTTCACTGGCTATGGAGTCAACAACACCTTCAAGGATTACACAAAAGACGGAATGTCATTCGCGAGGTACACGAATGTGAGTTCTGGTTCTGGTTTGGGTTCTTCTCTAGTGAAAACGAAGGATTCTGGTATCAGTGGCAGTTTGGTAAATAAGTGGGTAGAACCGGGCAAATTCTTCAGAGAGAAGATGATAAAGGAAGGTACCGTGATGCCCATCCCTGACATTAGGGATAAAATGCCTAAAAGGTCGTTTTTACCCCGGACCTTATTGTCGAAACTACCCTTCTCTACTTCTAAGATCCCTGAACTGAAGCAGATTTTCAAAGCCTCAGACAACGGTTCCATGGAGAAGATGATGAGAGAGTCATTGCAAGAGTGCGAGAGGGTCCCATCGCCCGGGGAAACGAAACGGTGCGTTGGATCGGTGGAGGACATGATCGACTTTGCAACTTCGGTTTTGGGTCGGAACGTTGCGGTTCGGTCAACCCTGAACGTAAACGGGTCGAAGAAGAATGTGTTGGTGGGTAAGGTTATTGGGATCAATGGTGGAAGGGTCACGCAGTCTGTGTCGTGTCATCAAAGTTTGTTTCCTTATTTGTTGTATTATTGCCATTCGGTTCCGAAGGTTCGGGTTTACGAAGTGGATCTACTTGACCCAAAAAGTAAGGATAAGATTAACCACGGTATTGCTATATGTCACTTGGATACTTCGGCTTGGAGCCCCACTCATGGTGCATTCCTTTCTCTTGGGTCGGGTCCGGGTCGGATTGAAGTTTGTCATTGGATCTTTGAGAATGACATGACTTGGACCATTGCTGATTGA 1929 0.5205 MNKQLNFSWLFILILFLSTSPFLLSVSSAADGGGGATNPFTPKASLLRYWDKEIRNNLPKPNFLLSKASPLTAVDAAAFSKLAGSGGGIALSTRLPEFCAAANLLCFPDLGASLEKHDKDANFAGYGDKNFTNYGTSRPGGSDAFKKYSDDANIPVNDFRRYGRDSAGHSESFSSYATDGNVVDQSFHTYGSSAAGGGGDFRGYASGVNVPNLGFTSYSDHATGRTQSFNSYSENGNAGQQSFTSYGKNGNKPENTFTGYGTESNVVGSGFSNYAETANAGNDTFKGYGVNMNNPTNTFSNYASGGNGAVESFTTYREQSNVGADSFTSYAKGTNAAKVEFSNYGKSFNEGTDTFSGYGKGSTGKTEVGFTGYGVNNTFKDYTKDGMSFARYTNVSSGSGLGSSLVKTKDSGISGSLVNKWVEPGKFFREKMIKEGTVMPIPDIRDKMPKRSFLPRTLLSKLPFSTSKIPELKQIFKASDNGSMEKMMRESLQECERVPSPGETKRCVGSVEDMIDFATSVLGRNVAVRSTLNVNGSKKNVLVGKVIGINGGRVTQSVSCHQSLFPYLLYYCHSVPKVRVYEVDLLDPKSKDKINHGIAICHLDTSAWSPTHGAFLSLGSGPGRIEVCHWIFENDMTWTIAD 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01502 642 MobiDBLite consensus disorder prediction 226 260 - -
Aip05g01502 642 ProSiteProfiles BURP domain profile. 427 641 IPR004873 -
Aip05g01502 642 SMART BURP_2 425 641 IPR004873 -
Aip05g01502 642 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 18 642 - -
Aip05g01502 642 Pfam BURP domain 427 639 IPR004873 -
Aip05g01502 642 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 18 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01502 Aip-Chr5 24552393 24555548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01502 - - gmx:100776642 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01502 05 24552393 24555548 Aip05g01502 05 24552393 24555548 ECH
Aip05g01497 05 24349533 24351898 Aip05g01502 05 24552393 24555548 PCT