Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01489 ATGCTCAAAGATTCCTCTGAAGATCAGGAATTAAGTAATATGAAGGTTAGAAATTATGATGCAGCAGAAAGTGTAGCTCAGAGCTTAAGGAATAGTCATGAGGAATCAGCTAAGGTTTCTTCATTTCCATTGGATTTGGGTAGCGGTTTGTGCCCCGTGGATTCTCTTGAACCAACTTCTATTAAGGAAGCTGGAAACTTTTTCTTGGTTCATAAAGTAACCCAGTCCTCACCTTCCCCTGCAATGTGTTTTGTGGCAAAGGTTCCTCAAGATGAACAAGAATCTCATATTGTAGCTTTTAGTTCAGAAGATGGATCCCGGAAGTTGGATGACGAGTCGACTTCATCTAGGACCATAGGTGTACGGGATGTACATATTTCGATGCGGTTAATGGAGGACTTCCTCCATCTTGCTAAAGAAAATACAGAAAAGGATGTGGAAACTTGTGGCATACTTGGTGCTGTACACGAGAATGGAACCCTCTATATGACTACTCTGATCATACCTAAGCAAGAATCAGCTTCCAATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTAAATGAAAGATCTCTTTATCCTGTGGGATGGATCCATACACATCCTTCTCAAAGTTGTTTCATGTCATCAGTGGATCTGCACACTCAATATTCCTACCAGATGATGATTCCTGAGGCATTTGCCATTGTCCTAGCTCCTACAGATACCTCAAGGTCTAGTTGTCTTGAATTTTATGACATCAACAAATGCTGA 762 0.4055 MLKDSSEDQELSNMKVRNYDAAESVAQSLRNSHEESAKVSSFPLDLGSGLCPVDSLEPTSIKEAGNFFLVHKVTQSSPSPAMCFVAKVPQDEQESHIVAFSSEDGSRKLDDESTSSRTIGVRDVHISMRLMEDFLHLAKENTEKDVETCGILGAVHENGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQMMIPEAFAIVLAPTDTSRSSCLEFYDINKC 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01489 253 Gene3D Cytidine Deaminase, domain 2 102 253 - -
Aip05g01489 253 SUPERFAMILY JAB1/MPN domain 124 236 - -
Aip05g01489 253 SMART pad1_6 123 252 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aip05g01489 253 PANTHER AMSH-LIKE PROTEASE 68 242 - -
Aip05g01489 253 PANTHER FI19924P1 68 242 - -
Aip05g01489 253 ProSiteProfiles MPN domain profile. 124 253 IPR037518 -
Aip05g01489 253 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 121 228 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01489 Aip-Chr5 24167621 24171176 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01489 K11866 - gmx:100807282 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01489 05 24167621 24171176 Aip05g01489 05 24167621 24171176 ECH