Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01465 ATGGCTGCAACAGCAGAAGCACCTATTTATGGGGATATCTTAGAGGCAATATTCTCGCACGTGCCACTAATCCATCTCGTACCGGCTTATCACGTGTCAAGGGCATGGAACCACGCTGTATCCTCCTCCCTGGCACACGTTAACCCCATCAAGCCATGGCTCACGATCCTCACACAGAGTAAACGTGATCCTCACGTGACAGCCACTTACGCCTACGACCCCCGCTCGCGCGTCTGGATTGAAATGAATCTTCAACCGTCGATCGAGCACGCCTCCGCCGTCCAATCATCCCAATCAACTCTGCTCTACACGCTAACCCCCGCGGGCTTCGCCTTCACGGATAGTGAAGGTGCGTTCCGCGTCTCGTGGCACAACGCGCCAGCACCGAGCGTGTGGCGCACCGACCCAGTCGTAGCGCGCGTGGGTAATCGCGTTGTGGTAGCTGGAGGCGCGTGCGATTTTGAGGACGACCTACACGCGGTGGAAGTCTACGACATGGAGGCACGCGCTTGGAACACGAGCCAGTCCATGCCTGAGCTGCTGAAGGGATCTGCAGGGTCCACGTGGCTCTCAGTCGCCGTTGTCGGTGACAAGATGCTGGTGACGGAGAAAAAATCCGGCGTGACTTTTTCGTTTGATCCATTTTCTGACACGTGGCACGGACCGTACGATCTTCGCCCGGATCAGAATGTGTTCTATTGCCTCACCGGAATCCTAGCGGGGAAATTGACGGTGGCCGGGGTGATGAGTGGCGCGGAAAACTCGAAGAGAGTGAAATTGTGGTCCGTGGAAGGGGAACTAGCTTCGGGTTCGGGATTTTGGTTCGAGGAAGTGGGAGAGATGCCGAATGAGATGGCGGAGAAGGTCATGAGAGGTTGGGATTTTGGTTCGGTGGTAGTGACTTGGGTTGGGAATTTTGCTTACGTTATGAACCCGGTTAAACCGGAGGAGGTGGTGGTTTGTGAGGTCGGGGCCAGGTGCGAGTGGTGGAGCGTGAGAAACGTTGCTGCGGGGGATTTGACGAAGAGAATGGTGGTTAGTGGCGGTGGCGTAAGCTTACAGGAGGTGCAGCGGGCGGTGGTTACGGAGAATCCAAGATTCTGCATGAAGCTAGTGTGA 1119 0.5612 MAATAEAPIYGDILEAIFSHVPLIHLVPAYHVSRAWNHAVSSSLAHVNPIKPWLTILTQSKRDPHVTATYAYDPRSRVWIEMNLQPSIEHASAVQSSQSTLLYTLTPAGFAFTDSEGAFRVSWHNAPAPSVWRTDPVVARVGNRVVVAGGACDFEDDLHAVEVYDMEARAWNTSQSMPELLKGSAGSTWLSVAVVGDKMLVTEKKSGVTFSFDPFSDTWHGPYDLRPDQNVFYCLTGILAGKLTVAGVMSGAENSKRVKLWSVEGELASGSGFWFEEVGEMPNEMAEKVMRGWDFGSVVVTWVGNFAYVMNPVKPEEVVVCEVGARCEWWSVRNVAAGDLTKRMVVSGGGVSLQEVQRAVVTENPRFCMKLV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01465 372 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 4 360 - -
Aip05g01465 372 Gene3D - 55 272 IPR015915 GO:0005515
Aip05g01465 372 SUPERFAMILY F-box domain 12 43 IPR036047 GO:0005515
Aip05g01465 372 SUPERFAMILY Kelch motif 52 284 IPR015915 GO:0005515
Aip05g01465 372 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 360 - -
Aip05g01465 372 Pfam Kelch motif 133 178 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01465 Aip-Chr5 23417768 23419452 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01465 - - gmx:100805691 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01465 05 23417768 23419452 Aip05g01465 05 23417768 23419452 ECH
Aip05g01465 05 23417768 23419452 Aip05g01465 05 23417768 23419452 PCT