Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01430 ATGGCTGACAGTTCCTCAGTCATTAATCCTGAACAAAAGGAGAACACCACTCCTACTCCATCAGATTTAAAATCTGAGCAACGGATACTAGTTAGTGGTGACTCCCATTCAGTTCAGATCACCACATTTCGACTCAATGGGTCAAACTACCTTAGGTGGTCTCAATCAGTTCAGATGTATATCCGTGGAAGAGGGAAGATTGGATATCTCACCGGTGAGCGAAGCCAGCCTAACATCACTGACCCACAATATCATGTGTGGGATACCGAAAATTCTATGGTGATGACATGGCTGGTGAACTCAATGGAGGAGGATATCAGCAGGAGTGACAATGTCACCAAATATTTCCACACATTGAAGCGGGTGTGGCAGGATCTTGACCATTTCAATAACTACAAGTGGAATTCAGCCGCTGATGCCAAACACTACCAACAAACAGTGGAAGAAGGGAGGATATTCCAGTTTCTTGCAGGCCTCAACGTGGAGCTAGATGAAGTTCGTGGCAGAATTATTGGAAGAGCAATCCTACCCTCAATTGGAGAAGTATTTGCTGAAGTTAGAAGAGAAGAAACTCGTAGAGCTGTGATGATGGGAAAAGGCAAGACTGAACAGACCTCCTTGGAGTCTAATGCACTTTTAGTGGCACCTACTGCACTTAAAAGTTCATCAAATCAAAAGCATCCCTCCAATCTTTGGTGTGACCACTGCAACAAACCTCGTCACACCCGAGAAACCTGTTGGAAGATTCATGGAAAACAAGCACATCTTAAAGGCAGCAAACCTGGTCCCAAAATACGCCCTACCCCAACTGCTCATGAGGCTGAAAAATCATCATTGAGTAAGGAACAGGTTGAGCAGCTCATAAGGCTGTTAAATTCCAGTTCTGTGTCTAGTACTCATAGTGGTTCTTTGGCTCAAACAGGTAATTTTAGTATTCCTATGTCCCTTAACTGCACCTCAAACTTGAATGCACCATGGATTGTCGATTCAGGTGCATCTGACCATATGACCAGCCTCTCCTCTTTATTTAAAACTTATTCTCCTTGCTTTGAAAATGAAAAAATTAGAGTTGCTGATGGTAGTTTTTCATCTATTGCTGGAAAAGGTACAATTAAACTATCCAAAAACATTGACCTAAGAAATGTCCTACATGTACCAAAGCTTTCTTGTAATCTTCTCTCTATTAGTAAAATTTGCAAGGATTCCAATTGTGCTGTGACATTCTTTGACACTCATGGTATTTTTCAGGACCGGACTTCGGGGAAGATGATTGGCAGTGCTAAGATGATGGATGGGCTTTATCACTTTGAGGATATTTTGGAGGATAAAATAGCTCAAGGATTTAGTGAATTAGTTGGAATCCAAACAGGAAAAGAAATACCACAAGAAAAGGAGCTTCGGTGTTATGTTCGGAAATATCCCAAGAAGACTAGAGACCAGCCCATCATCTCTGTACCAACCCAATCTGAAAACCCGGAAGAAGGCCCAACTCTTCAGGAACTTCCAGGTGATGACTTTTTGGAGCTAAAAGACTTGAAGGAGAAGCTTGCCAAAGCATTTGAAATCAAAGAACTTGGCTCATTAAAATACTTCCTTGGAATTGAATTTGCAAGGTCTAAGGAAGGCATTTTTATGAACCAACGAAAGTATATCCTAGATCTTTTAAAAGAGATGGGATTACTTGGTTGTAAAGCTGCTGAAACACCTATAGAGCCTAATTTAAAATTGAAGCCAGCTGAACCAGAAAATGTCATGGACAAAGGGAGATATCAGCGGTTGGTAGGGAGGCTAATCTATTTATCCCATACACGCccagatatagcctttgctgtgagcatgGCTGTAAACAAGCACCGTCTGATATTTGTTAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACAATCGGTGCTCCTGGTGGTACATCTTCAAGAATCATCAGTGTTGGTGCTTATGTTTCTCCTGCTATGGCTGTTGGTGCTCATTCTGTTGTTGAATCTCCATATGAGGAAATTGAATACACTTGGTCTAGTCGAGGATCAACAATTGATGGAGACCTTGATGTCGGTATAAGTGCTCCTGTTGCTGCATCAACTAAAAGCTTTACTAAAATTTGA 2118 0.4117 MADSSSVINPEQKENTTPTPSDLKSEQRILVSGDSHSVQITTFRLNGSNYLRWSQSVQMYIRGRGKIGYLTGERSQPNITDPQYHVWDTENSMVMTWLVNSMEEDISRSDNVTKYFHTLKRVWQDLDHFNNYKWNSAADAKHYQQTVEEGRIFQFLAGLNVELDEVRGRIIGRAILPSIGEVFAEVRREETRRAVMMGKGKTEQTSLESNALLVAPTALKSSSNQKHPSNLWCDHCNKPRHTRETCWKIHGKQAHLKGSKPGPKIRPTPTAHEAEKSSLSKEQVEQLIRLLNSSSVSSTHSGSLAQTGNFSIPMSLNCTSNLNAPWIVDSGASDHMTSLSSLFKTYSPCFENEKIRVADGSFSSIAGKGTIKLSKNIDLRNVLHVPKLSCNLLSISKICKDSNCAVTFFDTHGIFQDRTSGKMIGSAKMMDGLYHFEDILEDKIAQGFSELVGIQTGKEIPQEKELRCYVRKYPKKTRDQPIISVPTQSENPEEGPTLQELPGDDFLELKDLKEKLAKAFEIKELGSLKYFLGIEFARSKEGIFMNQRKYILDLLKEMGLLGCKAAETPIEPNLKLKPAEPENVMDKGRYQRLVGRLIYLSHTRPDIAFAVSMAVNKHRLIFVSSAGNSGPALSTIGAPGGTSSRIISVGAYVSPAMAVGAHSVVESPYEEIEYTWSSRGSTIDGDLDVGISAPVAASTKSFTKI 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01430 705 Gene3D Peptidase S8/S53 domain 595 703 IPR036852 GO:0004252|GO:0006508
Aip05g01430 705 MobiDBLite consensus disorder prediction 253 279 - -
Aip05g01430 705 MobiDBLite consensus disorder prediction 1 25 - -
Aip05g01430 705 PANTHER - 36 107 - -
Aip05g01430 705 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 503 570 IPR013103 -
Aip05g01430 705 PANTHER - 111 183 - -
Aip05g01430 705 PANTHER - 36 107 - -
Aip05g01430 705 SUPERFAMILY Subtilisin-like 606 694 IPR036852 GO:0004252|GO:0006508
Aip05g01430 705 Pfam gag-polypeptide of LTR copia-type 34 78 IPR029472 -
Aip05g01430 705 PANTHER - 111 183 - -
Aip05g01430 705 Pfam Subtilase family 616 694 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01430 Aip-Chr5 22054310 22059724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01430 509 612 Receptor kinase-like Gene Family AT4G23160 49.038 1.87e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01430 - - adu:110277909 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01430 05 22054310 22059724 Aip05g01430 05 22054310 22059724 ECH