Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01418 ATGGAGAATATAGGTAATGATGACCAGAGCCATCAGCCACTGCTATCTCCAGAAGACCAAATGCGGCCCCGGAACACGGTTGTTTTTACGACGGATTCCGATGACATTGGTCCGATCACAGGCCCCATAGATTTCTTGAGACAGTTCTCCATTGAGGCAAAGAAGCTGTGGTACCTGGCGGGCCCAGCCATCTTCACCTCCCTTTGCCAATACTCCCTTGGCGCTATCACTCAGCTTTTTGCCGGCCACGTCAGCACCATCGCCCTTGCCGCTGTTTCCATCGAGAACTCTGTCATCGCCGGCTTTTGCTTTGGCATCATGATTGGTATGGGAAGCGCGTTGGAAACGCTGTGCGGACAAGCCTTTGGAGCAGGGAAACCAGAGATGTTAGGTGTGTACATGCAAAGATCATGGATAATTCTGAACACCACCGCGCTTCTTCTATCCCTTCTATACGTATTCGCACGGCAGATCCTAAAGGCAATAGGAGAAACCACCGCGATCGCCGAGGCGGCCGGTGTTTTTGCGTTGTATATGATCCCGCAGCTGTTTGCCTATTCCATGAACTTCCCCATCCAGAAATTCTTGCAAGCTCAGAGCAAGATGATGATCATGGCATGGACCGCGGCGGTTGCATTGGTAGCGCATGCTGTGCTTAGCTGGGTACTAATGTTGAAATTGGGGTGGGGCCTGGTGGGTGCGGCGGCGGTGCTCAACGCGGCGTGGTGGTTCATGGTGATAGTTAAGATTGGTTATGTAGTGTGTGGGTATTGTGGTAAGACTTGGAGAGGCTTCTCCTTCCAAGCGTTTCAGAATCTTTGGGCCTTTCTTCGTCTCTCATTTGCCTCCGCTATCATGCTTTGCCTAGAAGTTTGGTATTTCATGGCCCTGATTCTTATTGCCGGTTATCTCAAGAATGCTGAAGTTTCGGTGGATGCCATGTCTATCTGCATGAACATACTAGGATGGATGATCATGCTAACCTTGGGAATGAATGCAGCAGTAAGTGTGAGAGTGTCAAATGAATTGGGAGCTCGTCACCCAAGAACGGCGAAATTTGCTATAGCTGTTGCTGTGATTACTACACTTATGGTTTCTTTCGTGCTCTCCATGGTTCTTGTCATCTTCAGAAAAGAATACCCTTCATTGTTTACAACGGATGAAGATGTGAAAGAGCTTGTGATAGAGTTGACACCCATGTTGGCGTTGTGCATTATAATCAACAATGTGCAACCAGTTCTTTCAGGTGTGGCTGTTGGGGCAGGTTGGCAAGCTACTGTTGCTTATGTCAACATTACTTGTTACTACTTAATTGGTGTTCCCCTTGGACTTTTGTTAGGTTTCAAACTTGACTTGGGTGTCATTGGGATTTGGTCTGGAATGATGTCAGGGACCATCCTACAATCTTGTGTGCTATTTTTTATGGTCTATAAGACAAATTGGAATAAAGAGGCCTCTCTTGCTGAAGATAGGATAAAGAAGTGGGGTGGGTCTAAAGATTCAGAAGAGAACTTGATTGCAAATTAA 1527 0.4728 MENIGNDDQSHQPLLSPEDQMRPRNTVVFTTDSDDIGPITGPIDFLRQFSIEAKKLWYLAGPAIFTSLCQYSLGAITQLFAGHVSTIALAAVSIENSVIAGFCFGIMIGMGSALETLCGQAFGAGKPEMLGVYMQRSWIILNTTALLLSLLYVFARQILKAIGETTAIAEAAGVFALYMIPQLFAYSMNFPIQKFLQAQSKMMIMAWTAAVALVAHAVLSWVLMLKLGWGLVGAAAVLNAAWWFMVIVKIGYVVCGYCGKTWRGFSFQAFQNLWAFLRLSFASAIMLCLEVWYFMALILIAGYLKNAEVSVDAMSICMNILGWMIMLTLGMNAAVSVRVSNELGARHPRTAKFAIAVAVITTLMVSFVLSMVLVIFRKEYPSLFTTDEDVKELVIELTPMLALCIIINNVQPVLSGVAVGAGWQATVAYVNITCYYLIGVPLGLLLGFKLDLGVIGIWSGMMSGTILQSCVLFFMVYKTNWNKEASLAEDRIKKWGGSKDSEENLIAN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01418 508 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 493 - -
Aip05g01418 508 TIGRFAM matE: MATE efflux family protein 62 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g01418 508 CDD MATE_eukaryotic 52 486 IPR045069 GO:0042910|GO:1990961
Aip05g01418 508 PANTHER PROTEIN DETOXIFICATION 31 21 493 - -
Aip05g01418 508 Pfam MatE 283 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip05g01418 508 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01418 Aip-Chr5 21655106 21660456 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01418 K03327 - gmx:100783627 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01418 05 21655106 21660456 Aip05g01418 05 21655106 21660456 ECH