Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01399 ATGGATCAGGATCAGGATCGTCCAGGTTTAGGCGTAGGGTTATGTGAAGGAGAAGAAGAGTACGGATCAGAATCGGGTTGGGTGGAAGCTCGAAGTTCATGCGATCATCTGTGCTCCCTCTCCCCTGATCTCAGCCATATTCCAGCCCCTCAGAATACTCCCTGCTACGAGTGCCAACACCCGTCTGAAAACTGGTTGTGTCTATCGTGTAAGGAGGTGCTGTGCAGCCGTTTTGTGAACAAGCACATGCTGTCTCACTCGCGGCGCACCAACCACTGTGTGGCACTCAGCTTCAGTGATCTATCAGTCTGGTGTTTCTCCTGTGACGCTTACTTGGATGCACAACTCATCCCACAACTACGCCCCGTTTATCAACTTGCCTACATCTTGAAATTTGGCCAACCTCCGCCACTTCCTCAACACAATTAA 429 0.5082 MDQDQDRPGLGVGLCEGEEEYGSESGWVEARSSCDHLCSLSPDLSHIPAPQNTPCYECQHPSENWLCLSCKEVLCSRFVNKHMLSHSRRTNHCVALSFSDLSVWCFSCDAYLDAQLIPQLRPVYQLAYILKFGQPPPLPQHN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01399 142 Pfam Zn-finger in ubiquitin-hydrolases and other protein 55 113 IPR001607 GO:0008270
Aip05g01399 142 SMART Zf_UBP_1 54 103 IPR001607 GO:0008270
Aip05g01399 142 SUPERFAMILY RING/U-box 32 125 - -
Aip05g01399 142 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 16 138 - -
Aip05g01399 142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 28 134 IPR013083 -
Aip05g01399 142 ProSiteProfiles Zinc finger UBP-type profile. 32 133 IPR001607 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01399 - - var:108319921 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01399 05 21103207 21104045 Aip05g01399 05 21103207 21104045 ECH