Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01075 ATGGCTGTGGAGAAGTTTTTACCGGTTGCTGCTTTTTTAGCTGTAATACTGCTTCTCCGTCACGCTCCTTCTGTCATTGCTGGGGACATAGTTCACGATGACGATTCTACCCCCAAGAAGCCCGGTTGCGAGAACCAGTTCGTTCTGGTGAAAGTGCAGACATGGGTCAATGACAAAGAGGATGATGAATTTGTTGGTGTGGGGGCCAGATTTGGCACAACAATTGTGTCCAAGGAGAAGAATGCTAAGCACACTCGCCTTATTCTTTCAGATCCCCGAGATTGTTGCAATCCTCCAAAGAATAAGATTGCGGGAGATGTCATCATGGTCGATCGAGGGAACTGCACCTTCACAAAGAAGGCAAAAACTGCACAAACTGCTAATGCTTCAGCTATCCTTATCATAAATAACCAAAAGGAGCTTTACAAGATGGTATGCGAACCAGATGAAACTGATTTGAACATACACATACCCGCTGTCATGCTCCCACGAGATGCAGGTGCAAGGCTCAAAGAAATGCTGACAAGTGCTTCATCTGTGTCTGTCCAGCTATATTCACCACGTCGACCAGCTGTTGATGTAGCAGAAGTATTTCTTTGGCTACTAGCAGTTCTTACCATATTGTGTGCATCATATTGGTCAGCATGGAGGGTCCGAGAAGCAGCTGATGAACACAACAAGCTATTAAAGGATGCTTCAGATGAAGTCCCAGACACTATAAACACAGGTGTTAGCAGAGTTGTAAACATGAATATGAAGGCTGCAATCCTTTTTGTTGTGCTAGCTTCATGTTTCCTGTTTATGATTTACAAATTGATGTCGCCATGGTTCATTGATATTTTGGTTGTTCTCTTCTGTATTGGTGGCGTTGAGGGCTTGCAAACTTGCTTGGTTGCTCTTTTGTCAAGGTGGTTCAAGCATGCTGCCAAGACATACATTAAAATACCTTTCTTTGGAGCTATCTCATACCTGACTTTGGCTGTTTCTCCATTTTGTATAACCTTTGCGGTTCTCTGGGCAGTTTATCGCACTCACTCGTTTGGGTGGATTGGTCAAGATATACTTGGAATTGCACTGATAATAACAGTTCTACAGATTGTACATGTACCTAATCTCAAGGTGGGTACGGTTCTTCTGAGTTGTGCCTTCATTTATGACCTCTTTTGGGTGTTTGTCTCGGCGAAGTTTTTCCAGCAAAGCGTGATGATTGTGGTAGCCCGAGCTGATGGAAGTGGTGAAGATGGTATCCCAATGTTACTGAAATTTCCCCGCATCTTTGATCCATGGGGTGGTTACAGCATTATAGGTTTTGGAGACATACTTTTACCAGGAATGCTGGTAGCATTCTCACTCAGATATGATTGGCTGGCGAACAAGAACATAAGAAATGGGTACTTCTTGTGGGCAATATTTGCATATGGCTTTGGCCTTCTAGTTACATATGTGGCACTAAATTTGATGGATGGACATGGCCAGCCAGCACTACTATACATTGTTCCATTTACCCTTGGGACTTTGCTGACATTAGGGCGAAAGCGAGGAGATCTGCAGGTTTTATGGACAAGAGGAGAACCAGAAAGACCCTGTCCACATATCAGACTCCAGCATAGTGGAGAAGTAAGCCCTGAATGA 1632 0.4393 MAVEKFLPVAAFLAVILLLRHAPSVIAGDIVHDDDSTPKKPGCENQFVLVKVQTWVNDKEDDEFVGVGARFGTTIVSKEKNAKHTRLILSDPRDCCNPPKNKIAGDVIMVDRGNCTFTKKAKTAQTANASAILIINNQKELYKMVCEPDETDLNIHIPAVMLPRDAGARLKEMLTSASSVSVQLYSPRRPAVDVAEVFLWLLAVLTILCASYWSAWRVREAADEHNKLLKDASDEVPDTINTGVSRVVNMNMKAAILFVVLASCFLFMIYKLMSPWFIDILVVLFCIGGVEGLQTCLVALLSRWFKHAAKTYIKIPFFGAISYLTLAVSPFCITFAVLWAVYRTHSFGWIGQDILGIALIITVLQIVHVPNLKVGTVLLSCAFIYDLFWVFVSAKFFQQSVMIVVARADGSGEDGIPMLLKFPRIFDPWGGYSIIGFGDILLPGMLVAFSLRYDWLANKNIRNGYFLWAIFAYGFGLLVTYVALNLMDGHGQPALLYIVPFTLGTLLTLGRKRGDLQVLWTRGEPERPCPHIRLQHSGEVSPE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01075 543 SUPERFAMILY PA domain 101 177 IPR046450 -
Aip05g01075 543 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 10 540 - -
Aip05g01075 543 Pfam PA domain 95 170 IPR003137 -
Aip05g01075 543 Gene3D - 33 187 - -
Aip05g01075 543 Pfam Signal peptide peptidase 247 524 IPR007369 GO:0004190|GO:0016021
Aip05g01075 543 PANTHER SIGNAL PEPTIDE PEPTIDASE 10 540 IPR007369 GO:0004190|GO:0016021
Aip05g01075 543 SMART psh_8 246 513 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01075 Aip-Chr5 15322963 15328137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01075 100 184 Miscellaneous Gene Families AT2G30290 35.484 2.96e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01075 K09597 - gmx:100796300 934.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01075 05 15322963 15328137 Aip05g01075 05 15322963 15328137 ECH