Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01073 ATGAGACAAGAGTTGGAGTTCGATCTCAATGACAAGTCTTCGGCGGATCTGAGCCCCAATACTGTTCTTCTATCTCCTCAATATTCTTTGAATGTGAAGAAAATATATAAAAAAGGAAAAGCTATTGGGAAAGATGAGTTTTTGAAACTAAAAGAGGACTTTGCCCAGATCAAATTTGCTCAATTCCACAATTCTTCGTACAACAAACTTCCCTGTAGATCTCATGGATTGGAAGGTAATGTAGGAGGGAGAGGAGGCTCCATTCTAAAGAAAATGGACACCATGGAGGGAAGGAAAAAGATAGAAATTTCATGTCGGAGTAGTGATGCCTCTTTTTCAGGTAGCATTGTTGATTCTTTATGTAGCTCAGATGATGAACCTTCTGAAATATCTCAGAATTCGAATGTGGCTTCACCATCTGTTTCGGCATCCTGGGCTTCTATGGAGTGCAACTCTCCAGAAATATTTATTGACTTCATAAATCCAGATGTTTGGGCTAGAAACTCTAGTGCAGTTGAAGGGGTAGATTCTATGTATTCAAAGGTAAGAAGTGATAATAAGGTTGCTTGTTCTACAATTAATGGTGATTCTCCTCTTCCGAAAGACACATTTGAGGCATTGCACAAATACCATAGTGCTATGGTTGAAGTTGCTGACTTTCCATATCCACTACAAAGTGATTGCTCATCTAGAGGTAACCCAAAACCGCCATTCAGCCCTGTCGGTAAAAGGCTGAATTCATTTGCGAAGTCAAAATCTCCGCAAAGTCCAGCCAGCCATATGCTAGAAGATACTAAGGTGAAATTGCCTGGGACTACTACTTTAACAAGAAACAGGACTTACCAGAAATCTCTGCTGAATGACTTCTCCAACGCCGCAAAACATGCTGACATTGTTTCTGAGTTTATAAGAAGAGATATTAAGTATTCAGGCCTAGCATGTTCACCGGTTCATCTGCACGGTAATCTGAGGTTGAAAATTAAGCAAGGGCTGCCAACTTTTGAGTTTAAGGTGAAATGCCCTGAAGATGTCTTTGTAGCAAAGCCTTGGAGAGCAGGTAATACTTCCAACTGGGTATATACCTTCCATTCCATCAATAGTAGAAAGAAAAGCGATGCCTCAGGTTTGAAGTCCCATGATTGTGACAAATATCCATCAATAGTAGCACAGATGTTAGTTTCATGTAATTTATGTTCAAAATTAGAAGGTGGAGTATTGGACAATTCGATGGTGACAGAATTTGTGTTGTATGATCTAATGCACTCAAGAAGAAGTGTTTCATGTAAAAAGAAGTCTAACACTGAGCAAGATGCTTCTAAAATGCTAAAAGCTTGCCGGGTAGGAGCAAAGGGAGAAACTCTCATGGTAGATGAGAAGAGTCTGGCTAGTAAAAACAAGCTTCCAACAAGCAATGTTGATTTTGATGAATCAAATTCATGTCCATTGTCATCCGCAGAATTGCATCCGAACCTTGAAATTGCTTCTATTCGTTTGCAAATTCCATTGGATAAGAGAAAAAGCTTGAAATACAAAAGAAAGGATATGAGAGAGGCTAACTCGTTTTCCAAACTAAGTGATGTCTCTTCAGTTGTAGAGCACTGTAGAAAAAGCTTCCACAACAGGAAAATGCAGGAACAAGTGAAGGTGGTACTACCAACTGGCATTCATGGTTTGCCGAGTGGCGAAAACCTTGGTCCCTCATCATTACTTGATCGATGGAAACATGGTGGAGGTTGCGACTGTGGTGGCTGGGACATGGCCTGTCCCCTTATTCTTTTAGGCAATCCTAGTATTCAGTTTGCTGAAGACCAGCCCCTCATAAAGGATTATCAACCACTGCAACTTTTTCTTCAGGGAGCCAAGGAAAATACTCCTACCTTTAGCATGAGCAGAGTTGAAGAGGGTGAATATACAGTTGATTTCCATGCTCGGTTATCCCCGTTACAAGCCTTCTCCGTTTGTGTCGCCATTTTGCATGGCACTTCCACTTGTAGCCTTGCACGGAGGGAGAAAAACCAGCCATTATCTCAATGTAATTCACTGGAAATGCTAATGAGGGAGGAAGCAGAGCTTTTTATGCAATCAAAGGAGAAGAACAAGACCATGTCCAAGACTCACAAAGGGATTCCTCTACCTTATGTAACGATGCCACCCTTTTCTCCTGTTGCACGAGTATAA 2178 0.41 MRQELEFDLNDKSSADLSPNTVLLSPQYSLNVKKIYKKGKAIGKDEFLKLKEDFAQIKFAQFHNSSYNKLPCRSHGLEGNVGGRGGSILKKMDTMEGRKKIEISCRSSDASFSGSIVDSLCSSDDEPSEISQNSNVASPSVSASWASMECNSPEIFIDFINPDVWARNSSAVEGVDSMYSKVRSDNKVACSTINGDSPLPKDTFEALHKYHSAMVEVADFPYPLQSDCSSRGNPKPPFSPVGKRLNSFAKSKSPQSPASHMLEDTKVKLPGTTTLTRNRTYQKSLLNDFSNAAKHADIVSEFIRRDIKYSGLACSPVHLHGNLRLKIKQGLPTFEFKVKCPEDVFVAKPWRAGNTSNWVYTFHSINSRKKSDASGLKSHDCDKYPSIVAQMLVSCNLCSKLEGGVLDNSMVTEFVLYDLMHSRRSVSCKKKSNTEQDASKMLKACRVGAKGETLMVDEKSLASKNKLPTSNVDFDESNSCPLSSAELHPNLEIASIRLQIPLDKRKSLKYKRKDMREANSFSKLSDVSSVVEHCRKSFHNRKMQEQVKVVLPTGIHGLPSGENLGPSSLLDRWKHGGGCDCGGWDMACPLILLGNPSIQFAEDQPLIKDYQPLQLFLQGAKENTPTFSMSRVEEGEYTVDFHARLSPLQAFSVCVAILHGTSTCSLARREKNQPLSQCNSLEMLMREEAELFMQSKEKNKTMSKTHKGIPLPYVTMPPFSPVARV 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01073 725 PANTHER EXPRESSED PROTEIN 6 725 - -
Aip05g01073 725 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 6 725 - -
Aip05g01073 725 Pfam Domain of unknown function (DUF3527) 316 660 IPR021916 -
Aip05g01073 725 SUPERFAMILY Tubby C-terminal domain-like 622 664 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01073 Aip-Chr5 15297905 15301796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01073 - - gmx:112998369 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01073 05 15297905 15301796 Aip05g01073 05 15297905 15301796 ECH
Aip05g01073 05 15297905 15301796 Aip03g03207 03 104589037 104589315 PCT