Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01068 ATGGAACCCCTCTTCTTCGTGCAGTCGTGCTCTACCGTTCAATCCCAGGCCGCCACCGCGCACCACCCATCCTGCCGCAACGCTCCCCACGTCTGGCCTCTCACCGCATCTCGTGCTCTCATCTCTCAGCCTTCCAAGTTTCAGCAGGGTTTCCATATCCTGGAGAAACCACCCGTGTTATATATTTTGTTGCTTTGTTGTGTGAAGGCGCTTCAGCTGTTTCATGATTTGGTGAACAAGAATGAACCAGCTCGGTTGCTTGGTTTGGATGTCGGTGATAAATACGTTGGTCTTGCTCTTTCCGACTTCCAGAACAAGATTGCTTCGCCCTTTAGTGTTCTGGTCAGGAAGAAATCAAATATTGATTTAATGGCTTCCGATTTCGAGACTCTAATCTCTAAATATTCATTGAAGGGCTTTGTTGTTGGCCTCCCTTTCAGCTGTCACCGTGTTTCTACTGATGCTGGACAAGTGAAGGTCTTCATTGATGCCCTTTCTAGAACTAAAAAACTTCAAGGTCTGAAATATACTTATTGGAACGAGTCTTTCACGTCAAAGAATGTTGAATTGCTCTTAAGGCCTTTGAACTTGAATAATGCAGTTCATTCCAAGACTATGCTCGACAAATTTGCTGCTGTAGGGATACTCCAGGGGTACCTGGATTATGTTAACAGAAAAATGAAGTTAATTGAAACAGATGTGTTTGTTGGATTCTCACAATTTGATGAATTAGGTCTCTTTCTGCAGGTAGGCATGAGCCAGATATCACATGTAGAAAACTGTTGTTGTAAAGGTGTAAGCACCAAAGTAGGGGAAGGAAAAATTGGCTTCACAGAAGATCAAACGTGCGACATCAACTCCAGCAAATTTTAA 873 0.4364 MEPLFFVQSCSTVQSQAATAHHPSCRNAPHVWPLTASRALISQPSKFQQGFHILEKPPVLYILLLCCVKALQLFHDLVNKNEPARLLGLDVGDKYVGLALSDFQNKIASPFSVLVRKKSNIDLMASDFETLISKYSLKGFVVGLPFSCHRVSTDAGQVKVFIDALSRTKKLQGLKYTYWNESFTSKNVELLLRPLNLNNAVHSKTMLDKFAAVGILQGYLDYVNRKMKLIETDVFVGFSQFDELGLFLQVGMSQISHVENCCCKGVSTKVGEGKIGFTEDQTCDINSSKF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01068 290 SMART rnase_8s 84 188 IPR006641 GO:0006139
Aip05g01068 290 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 68 228 - -
Aip05g01068 290 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 68 228 IPR005227 GO:0006364
Aip05g01068 290 Hamap Putative pre-16S rRNA nuclease [yqgF]. 84 224 IPR005227 GO:0006364
Aip05g01068 290 Pfam Holliday junction resolvase 85 221 IPR005227 GO:0006364
Aip05g01068 290 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 87 221 IPR005227 GO:0006364
Aip05g01068 290 CDD YqgF 86 221 IPR005227 GO:0006364
Aip05g01068 290 SUPERFAMILY Ribonuclease H-like 85 224 IPR012337 -
Aip05g01068 290 Gene3D - 83 230 IPR037027 GO:0006139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01068 - - aip:107643075 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01068 05 15231221 15233818 Aip05g01068 05 15231221 15233818 ECH